Tk02713, Tk02713 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk02713
Unique NameTk02713
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length338
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 130..153
e-value: 0.72
score: 18.9
coord: 101..124
e-value: 0.26
score: 20.3
coord: 275..297
e-value: 0.17
score: 21.0
coord: 246..269
e-value: 0.27
score: 20.3
coord: 24..47
e-value: 2.2
score: 17.3
coord: 188..211
e-value: 0.27
score: 20.3
coord: 159..182
e-value: 0.38
score: 19.8
coord: 217..240
e-value: 0.014
score: 24.5
coord: 72..95
e-value: 0.055
score: 22.6
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 277..297
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 248..269
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 132..153
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 74..95
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 190..211
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 159..187
score: 11.281
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 246..274
score: 12.84
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 217..245
score: 10.471
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 275..302
score: 9.66
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 188..216
score: 12.57
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 130..158
score: 11.801
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 72..100
score: 13.962
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 101..129
score: 10.346
NoneNo IPR availableGENE3D3.30.160.60coord: 68..125
e-value: 9.1E-12
score: 46.9
coord: 186..245
e-value: 1.0E-13
score: 53.2
NoneNo IPR availableGENE3D3.30.160.60coord: 246..268
e-value: 1.2E-7
score: 33.3
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 246..269
e-value: 0.0054
score: 17.0
coord: 74..95
e-value: 0.0099
score: 16.2
NoneNo IPR availableGENE3D3.30.160.60coord: 126..154
e-value: 7.1E-6
score: 27.8
coord: 155..185
e-value: 1.3E-5
score: 26.9
NoneNo IPR availableGENE3D3.30.160.60coord: 269..322
e-value: 1.2E-6
score: 30.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 293..338
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 294..310
NoneNo IPR availablePANTHERPTHR43950FAMILY NOT NAMEDcoord: 25..236
coord: 70..298
NoneNo IPR availablePANTHERPTHR43950:SF1FI01120P-RELATEDcoord: 25..236
NoneNo IPR availablePANTHERPTHR43950:SF1FI01120P-RELATEDcoord: 70..298
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 70..107
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 230..284
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 118..164
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 172..223

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold809_size94238-processed-gene-0.17-mRNA-1snap_masked-scaffold809_size94238-processed-gene-0.17-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk02713 ID=Tk02713|Name=Tk02713|organism=Tigriopus kingsejongensis|type=polypeptide|length=338bp
MNASLTSTPSAPSTAWPTFVYTEFACEQCEFRALRQIDVELHKRSVHQEN
GSCTLGPMPTGGGGRSRRARAHGCDQCGTAFAQKAHLDTHLKTVHAADKP
FKCPLCHYEGTSKAMFDKHHKLTHLKERPFECHICLKKFGQKVHRDIHIK
AIHERERPFGCDECAYRATTKGLLDKHVKLVHRQEKPFACPQCASRFGQK
SHWQKHVHTVHTRDRPWPCQQCPHTAGTRGALQRHVKVVHERDKPFECGV
CSHKFAQKAHLMSHAQKSHTQESPFRCYQCPLVFTTVTELKSHSSIHDQP
ESHDSSNGHEVDHQTSTSPPYHLKVPHLAGAPPGPFVV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
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