Tk02788, Tk02788 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk02788
Unique NameTk02788
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length1264
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008952Tetraspanin, EC2 domain superfamilyGENE3D1.10.1450.10coord: 124..195
e-value: 2.5E-6
score: 29.2
IPR008952Tetraspanin, EC2 domain superfamilySUPERFAMILY48652Tetraspanincoord: 136..222
IPR018499Tetraspanin/PeripherinPFAMPF00335Tetraspannincoord: 19..253
e-value: 2.8E-23
score: 82.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1175..1221
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1238..1257
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1175..1264
NoneNo IPR availablePANTHERPTHR19282TETRASPANINcoord: 19..248
NoneNo IPR availablePANTHERPTHR19282:SF233CD63 ANTIGENcoord: 19..248
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 43..61
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 94..116
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 117..226
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 83..93
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 62..82
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 227..253
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 254..1264
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..42
NoneNo IPR availableCDDcd03127tetraspanin_LELcoord: 133..222
e-value: 1.95358E-11
score: 59.0551
NoneNo IPR availableTMHMMTMhelixcoord: 20..42
NoneNo IPR availableTMHMMTMhelixcoord: 94..116
NoneNo IPR availableTMHMMTMhelixcoord: 62..84
NoneNo IPR availableTMHMMTMhelixcoord: 223..245

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold728_size105512-snap-gene-0.18-mRNA-1maker-scaffold728_size105512-snap-gene-0.18-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk02788 ID=Tk02788|Name=Tk02788|organism=Tigriopus kingsejongensis|type=polypeptide|length=1264bp
MSAMPRIPKVSSSSGRLLILLIASLLLMALGIALIVLGSILLGSFKLHHL
SFASGLFRATPILIILSGVGTTVVAVWGVILWHRQEEVSFGLRLFSFLLL
LSCLLCVIACILSFLLREVAAVHFPNTNVLSQLRRFEANEVIRHRWNSLQ
RAYQCCGGHEQGYRDWTPNSGLLKSVPDSCCQEEFEGCGLQLDFNQELAV
PRVDNKINVEGCMPVIKAAMRSSVLPILMACALLALVAALIELLLMLCAF
CFADHVKKMKDTQRSHLSLATGHPGAPPVWARPLDRLNLPVLDASPSLKQ
NRQFFPNQSDSPEPAPSLISSSSKNDESLYDQINSPAHGNPGLEGASGRS
KPPSTGFFSKWFGREEPRDHQENLEMDSIYRRKEALYNDALDREYTLMGV
LKNVSAKPSEAAEDIEKGEGHPRTESHSSKKGFSFFGFKSKSRDNVLASD
SKLDKDGAETRDDVNQTKALSLDNLAKKDSDHSRGFHGFLGRSKDKLNES
GQGLKSRRNSDAPKSESANLKARSRSHDEVRSSSDSSQYKLKLPAWLSTQ
AQPKRGDTVDDRANEPGFEEIDLKTPEIEPNQSETENGKKYEESPLRKFI
PKWSSYTPFVAKTKSHHQSKEDMKRADEDYQSSQRFEDTSKSILTRGVSP
IGHRDDTIIVDSIDGDISNKPPEEMEISVPMEPIDSPAAYADSPLTTGFP
VTSKKTRESRKLKRPTWMSKPFQAVDAAARIRGKSADAIHSRNEDDLRSR
KVGSSGRRERSADDHLQNSLPSLNSSGPASLLPQRKPTIIGSTEDILDFQ
KDASGFYDKNLNSDEWDEGSKVRVSGFGLNKAPASGDIQSIRRPISRPVH
QSDEERIAKIESEVVDSKPQSKKKVSYADEATQSDPRSGNGKKDHDFMNH
IKKGNYYGQLKIPTVGGKSETSTKSSPDPTERRSSQTHLESSKPKENEPR
TLSDHDFMKHIEKSGYYGNLKVPSSQYPEGKWKEDKVTRLELETSSPNPY
ETNWSDMKGLKTPIPTDAFYKRYTGGLEAKTPNSKDTRRKSENGTYSSVY
DVRSKAPSAEGLKQKPPRKSRRSASASSISSVDSSVSSSGRRGSSSTGKK
KKKGDLHKLKNPQFYLDKTDGRILAAFETEVPARRRGRSMDNLDVRHRRH
GDDDDLYLPFGTTEYWIQEVDRRLQESRLQPTERGHRAKSEPRNSRRTEL
RISRDESRPDRRAKSTDRFSRSKRPTSTMPSGEPPNRAMRSLDRHPQQRR
SHQEHRYIGDQSQF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008952Tetraspanin_EC2_sf
IPR018499Tetraspanin/Peripherin
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
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