Tk03036, Tk03036 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk03036
Unique NameTk03036
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length389
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002666Reduced folate carrierPIRSFPIRSF028739Folate/thiamine_transportercoord: 207..389
e-value: 5.4E-43
score: 145.2
coord: 1..215
e-value: 1.5E-80
score: 269.1
IPR002666Reduced folate carrierPFAMPF01770Folate_carriercoord: 6..203
e-value: 2.8E-79
score: 266.7
coord: 215..355
e-value: 5.6E-41
score: 140.5
IPR002666Reduced folate carrierPANTHERPTHR10686FOLATE TRANSPORTERcoord: 7..205
coord: 213..381
NoneNo IPR availableGENE3D1.20.1250.20coord: 7..376
e-value: 8.7E-13
score: 49.7
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 261..277
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 348..353
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 106..124
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 284..306
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 53..71
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 72..82
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 307..325
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 125..135
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 157..167
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 377..389
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 83..100
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 101..105
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 256..260
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 189..230
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 278..283
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 231..255
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 326..347
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 168..188
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 136..156
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 354..376
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..52
NoneNo IPR availableTMHMMTMhelixcoord: 77..99
NoneNo IPR availableTMHMMTMhelixcoord: 354..376
NoneNo IPR availableTMHMMTMhelixcoord: 229..251
NoneNo IPR availableTMHMMTMhelixcoord: 106..123
NoneNo IPR availableTMHMMTMhelixcoord: 325..347
NoneNo IPR availableTMHMMTMhelixcoord: 261..278
NoneNo IPR availableTMHMMTMhelixcoord: 169..188
NoneNo IPR availableTMHMMTMhelixcoord: 50..72
NoneNo IPR availableTMHMMTMhelixcoord: 283..305
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 52..371

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold1070_size64748-snap-gene-0.13-mRNA-1maker-scaffold1070_size64748-snap-gene-0.13-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk03036 ID=Tk03036|Name=Tk03036|organism=Tigriopus kingsejongensis|type=polypeptide|length=389bp
MALREFLGTLVILCLFGFFKELKPSEPYLTEYLTGEEFKNITKDDVYQKV
YPIWSYSYFVLLIPVFLLTDLVRYKPMIMFEGLAYVLTWVILLWAEGVGA
MQAMQFVYGMATATEIAYYTYIYAKVPQEDFKRVSSLTRFSVLMGKFVSG
LLSQLLDSLDVLDYRDLNYISLAGVGTAFILSLLLPWVKTSIYFHQEKTS
EESQSGNLCSKATGLLWSHAKGSYTQNIYNGAIEAITTLCGALIVALVGL
IDIPWQKIGDYAILVISILGGVVLAVMSQSNSIWVAYIGYILIRMAYQLL
MTVASFELASNIPSDSSGLVFGLNTWVALGLESILTLVVADAAGLALPIR
QQFVVYASLYAIVGIVFALVFLIKAFCSSSPTKSIRSNA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002666Folate_carrier
IPR036259MFS_trans_sf
Vocabulary: Molecular Function
TermDefinition
GO:0090482vitamin transmembrane transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0051180vitamin transport
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