Tk03188, Tk03188 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk03188
Unique NameTk03188
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length717
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001627Sema domainSMARTSM00630semacoord: 1..421
e-value: 4.3E-129
score: 444.8
IPR001627Sema domainPFAMPF01403Semacoord: 5..418
e-value: 6.1E-122
score: 407.3
IPR001627Sema domainPROSITEPS51004SEMAcoord: 1..441
score: 105.43
IPR016201PSI domainSMARTSM00423psinew7coord: 443..502
e-value: 2.8E-10
score: 50.2
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..443
e-value: 1.4E-145
score: 487.5
IPR002165Plexin repeatPFAMPF01437PSIcoord: 443..476
e-value: 4.4E-7
score: 30.2
NoneNo IPR availableGENE3D3.30.1680.10coord: 444..505
e-value: 8.3E-14
score: 53.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 666..693
NoneNo IPR availablePANTHERPTHR11036:SF87MIP07328Pcoord: 1..632
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 594..617
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 618..717
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..593
NoneNo IPR availableSUPERFAMILY103575Plexin repeatcoord: 443..477
NoneNo IPR availableTMHMMTMhelixcoord: 594..616
IPR027231SemaphorinPANTHERPTHR11036SEMAPHORINcoord: 1..632
IPR036352Sema domain superfamilySUPERFAMILY101912Sema domaincoord: 4..445

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold91_size383040-snap-gene-2.20-mRNA-1maker-scaffold91_size383040-snap-gene-2.20-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk03188 ID=Tk03188|Name=Tk03188|organism=Tigriopus kingsejongensis|type=polypeptide|length=717bp
LELQDNMLLIGAVNNVYFLDTRTMREIKPLRIVWSPALQDIELCSLKGKS
KSECQNYIRIIAKLDQKKLLICGTHAYRPKCRHYKFQEGRYTQEKEFEGI
GLSPFDPYHNSSYVMSGGDLYTATVSDFSGSDPLIYKEPLRTAQSDFKQL
NSPDFVKSLDDGEFVYFFFREQAVEFINCGKSVYSRVARVCRSDAGGPNK
YKNSWTTFLKSRLNCSLPGEYPFYFDHLQAASDIVDGTYGGQASRLVYAV
FTTPKNSISGNAICAFRLRDLLDTFEGAFKEQETANSNWLPVAKIKEPIP
RPGRCSADPKKLPETSLNFVRGHSIMDEAVPSFFGGRPLFVKANLMRPTQ
FRELAVDPQVQTSDGQTYDVLFVGTTKGRVLKIVNTADPTNLRSSQPTLI
EEIIVFQPNVPIERLRVVKHSTETTSKLVVMTTEAVISIPVARCSAAKSC
HSCIALQDPYCAWDISRSLCTHLQEHLEAEAAKVDSASFLQNVIEGKHKQ
CGAQFDENEFHNDDLITSNGRNDAMVGSPEAPSSSQVLLDQQSDGIDGRL
DPEGNPFNDHLHPSATNGRGGVGGGVTILQHGEGFESHYSTEELSMAVAT
SCVCALVVGFVSGFLLARRCSCSRREENPYHVPYLNQSGYQDDQIYAKVD
DMTYYPVNNMLVSLPNTNSTSHSSHSPALPSVPPPSSLASKTLSLHHPRP
VDFQGFGTVHRSQKIFL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001627Semap_dom
IPR016201PSI
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR002165Plexin_repeat
IPR027231Semaphorin
IPR036352Semap_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
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