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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR000301 | Tetraspanin | PRINTS | PR00259 | TMFOUR | coord: 394..422
score: 15.55
coord: 367..393
score: 35.07 |
| IPR018499 | Tetraspanin/Peripherin | PFAM | PF00335 | Tetraspannin | coord: 331..461
e-value: 2.4E-14
score: 53.5 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 122..153 |
| None | No IPR available | PANTHER | PTHR19282:SF283 | TETRASPANIN | coord: 331..443 |
| None | No IPR available | PANTHER | PTHR19282 | TETRASPANIN | coord: 331..443 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 395..399 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 400..422 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 423..462 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 1..371 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 372..394 |
| None | No IPR available | TMHMM | TMhelix | | coord: 372..394 |
| None | No IPR available | TMHMM | TMhelix | | coord: 399..421 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk03279 ID=Tk03279|Name=Tk03279|organism=Tigriopus kingsejongensis|type=polypeptide|length=462bp
MARKHYFTHCHTLIPPRGGGFEWTELRPIRPNQDVLLPGVVIRGTGLDFQ
TKNRDRYRSRHGFSQTDGIAQYSGKFYPFQDHLRFKDTQFAPDHLELPKD
FLTPYCASHDLRTLSEHSFASSRPSLSSQSWRRDLNPRPRRRHVSAGQPE
LAKKMTFGGTFEAGAIEKDRPRSDQRFDRLRKRGRKWESCSCLSSLPSIG
GEGGLHHNEDLRLMFPPKSSSRSRYPSGQEFSSISLLSKDILSNEAQLRP
TSRESLQHAYSQLYRNQLPDALQSDILMDQQHICAKWSDVDSEAGKISEM
GEDLVKDSIDEVSKMLMKQATLDHTTKEKHLLGCLVLGFGIYALVNNGQN
DILIFDVDSSLYQNIHSNTAEIILVIVSGIIILVSFLGCCGAVLENRGVI
FVYFTIMLITTVITTIGSTLVFTKTIDDVTQPLLSSLQRYNPNSTDVGPI
QMTQVWDQVQSE back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
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