Tk03311, Tk03311 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk03311
Unique NameTk03311
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length709
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 395..419
e-value: 22.0
score: 10.2
coord: 532..556
e-value: 27.0
score: 9.4
coord: 427..449
e-value: 0.032
score: 23.4
coord: 337..361
e-value: 0.0058
score: 25.9
coord: 295..319
e-value: 0.39
score: 19.8
coord: 458..480
e-value: 2.1
score: 17.4
coord: 587..610
e-value: 1.9
score: 17.5
coord: 236..257
e-value: 86.0
score: 5.0
coord: 560..584
e-value: 0.0018
score: 27.5
coord: 486..508
e-value: 0.0011
score: 28.2
coord: 264..289
e-value: 0.24
score: 20.5
coord: 367..389
e-value: 0.0059
score: 25.8
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 397..419
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 589..610
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 429..449
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 297..319
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 339..361
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 488..509
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 266..289
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 562..584
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 369..389
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 367..394
score: 14.461
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 427..454
score: 11.094
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 486..513
score: 12.133
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 337..366
score: 13.027
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 295..324
score: 10.803
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 264..294
score: 11.281
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 395..424
score: 10.554
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 587..611
score: 8.954
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 560..584
score: 11.177
NoneNo IPR availableGENE3D3.30.160.60coord: 260..333
e-value: 5.3E-8
score: 34.9
NoneNo IPR availablePFAMPF13894zf-C2H2_4coord: 486..509
e-value: 9.7E-4
score: 19.7
NoneNo IPR availableGENE3D3.30.160.60coord: 362..391
e-value: 2.0E-9
score: 39.0
NoneNo IPR availableGENE3D3.30.160.60coord: 529..608
e-value: 6.3E-7
score: 31.5
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 428..449
e-value: 4.2E-5
score: 23.7
coord: 560..584
e-value: 3.2E-4
score: 20.9
NoneNo IPR availableGENE3D3.30.160.60coord: 392..452
e-value: 1.9E-8
score: 36.2
NoneNo IPR availableGENE3D3.30.160.60coord: 334..361
e-value: 1.7E-9
score: 39.4
NoneNo IPR availableGENE3D3.30.160.60coord: 453..518
e-value: 8.1E-10
score: 40.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 639..709
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 667..699
NoneNo IPR availablePANTHERPTHR43974:SF5LD05664Pcoord: 232..514
coord: 337..606
NoneNo IPR availablePANTHERPTHR43974FAMILY NOT NAMEDcoord: 232..514
coord: 337..606
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 456..508
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 546..596
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 428..467
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 248..300
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 361..414
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 306..376

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold355_size198070-processed-gene-0.17-mRNA-1snap_masked-scaffold355_size198070-processed-gene-0.17-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk03311 ID=Tk03311|Name=Tk03311|organism=Tigriopus kingsejongensis|type=polypeptide|length=709bp
MNKKAASTSVPSPFVVLPEDLKDKIKEEKPDENALEGFGPPLSLPKGQLI
LVHRPNNNNGNTIADDVAHKIKEEPLDEDVTDGPSTAQVVSLNDAITIKT
EARFLEEPHESKPEDDEGEEGDEGDSIFDSDEDFEDDFQDDSDDSDFEMD
LSEDADSPDGMGPRPHPQTGISSKASSVLDLNLVKEEIDEGDIDIEDHSI
DGEASNSDSDTTEGGRPKRGSFDFNGMKIETNGNYSKCPTCKKNIKSTFI
IRHIKLHNQPEEQYKCPEKKCNLMVNRINNLFRHLKVVHKSKKPYLCKDR
NCTERFAKASELRTHFMKHREERRKTEIDQDGPNRIFACEFPGCGKEYKK
RHHLKEHERKHTGDMKYSCEVCGKRFYIQAHMKRHLYSHTGIKPHVCRWK
CGAIFASYGGRMKHERINHYDENPLRSECDICGRPFKNQQQLVKHRMTHL
NPEERKDYRCSYCHIMFDTIKLRERHEERHKDGEVFSCETCEKVFKNEKN
LNHHVKTHHMKKSDKPTTPNAKKGKKEPPPKHPCHICGPPKMYCLTSLRR
HLARIHSTNYKCPRDDCGKCFKEKFQLEAHVEIHRLRECHLCGKKFQRKQ
NADIHLLGVHALSVGDLSKLGRWNPKNEGETAPEYMTRKTNVSFKNFRKK
GKGSGKRDEDPEGTSASEQGDESNLTGEDTNSVKDMADETNSSSSNDFIA
IEDIKDEPI
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Add to Basket