Tk03976, Tk03976 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk03976
Unique NameTk03976
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length1712
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002172Low-density lipoprotein (LDL) receptor class A repeatPRINTSPR00261LDLRECEPTORcoord: 1092..1113
score: 41.69
coord: 1023..1044
score: 44.35
coord: 488..509
score: 44.46
coord: 1053..1074
score: 32.15
coord: 451..472
score: 30.71
IPR002172Low-density lipoprotein (LDL) receptor class A repeatSMARTSM00192LDLa_2coord: 930..964
e-value: 0.025
score: 18.5
coord: 412..450
e-value: 0.011
score: 21.6
coord: 476..514
e-value: 9.7E-9
score: 45.0
coord: 1011..1049
e-value: 7.9E-9
score: 45.3
coord: 1079..1118
e-value: 7.5E-6
score: 35.4
coord: 1462..1502
e-value: 2.4E-7
score: 40.4
coord: 1411..1448
e-value: 0.0043
score: 25.4
IPR002172Low-density lipoprotein (LDL) receptor class A repeatPFAMPF00057Ldl_recept_acoord: 1010..1047
e-value: 4.2E-8
score: 33.2
coord: 1080..1116
e-value: 2.2E-5
score: 24.4
IPR002172Low-density lipoprotein (LDL) receptor class A repeatPROSITEPS50068LDLRA_2coord: 476..513
score: 11.375
IPR002172Low-density lipoprotein (LDL) receptor class A repeatPROSITEPS50068LDLRA_2coord: 1462..1501
score: 10.725
IPR002172Low-density lipoprotein (LDL) receptor class A repeatPROSITEPS50068LDLRA_2coord: 1411..1447
score: 8.738
IPR002172Low-density lipoprotein (LDL) receptor class A repeatPROSITEPS50068LDLRA_2coord: 1011..1048
score: 12.075
IPR002172Low-density lipoprotein (LDL) receptor class A repeatPROSITEPS50068LDLRA_2coord: 1079..1117
score: 10.338
IPR002172Low-density lipoprotein (LDL) receptor class A repeatPROSITEPS50068LDLRA_2coord: 412..449
score: 9.812
IPR002172Low-density lipoprotein (LDL) receptor class A repeatCDDcd00112LDLacoord: 1463..1500
e-value: 2.72043E-7
score: 46.0458
IPR002172Low-density lipoprotein (LDL) receptor class A repeatCDDcd00112LDLacoord: 1012..1047
e-value: 1.6182E-7
score: 46.8162
IPR002172Low-density lipoprotein (LDL) receptor class A repeatCDDcd00112LDLacoord: 1082..1116
e-value: 8.15342E-5
score: 39.1122
IPR002172Low-density lipoprotein (LDL) receptor class A repeatCDDcd00112LDLacoord: 477..512
e-value: 2.19693E-6
score: 43.3494
IPR001254Serine proteases, trypsin domainSMARTSM00020trypsin_2coord: 679..907
e-value: 1.3E-70
score: 250.6
IPR001254Serine proteases, trypsin domainPFAMPF00089Trypsincoord: 680..907
e-value: 2.4E-55
score: 187.7
IPR001254Serine proteases, trypsin domainPROSITEPS50240TRYPSIN_DOMcoord: 680..912
score: 31.954
IPR001254Serine proteases, trypsin domainPROSITEPS50240TRYPSIN_DOMcoord: 1192..1396
score: 10.796
IPR001254Serine proteases, trypsin domainCDDcd00190Tryp_SPccoord: 680..910
e-value: 1.0064E-68
score: 229.085
NoneNo IPR availableGENE3D4.10.400.10coord: 1007..1047
e-value: 1.0E-9
score: 40.4
NoneNo IPR availableGENE3D2.40.10.10coord: 673..913
e-value: 2.3E-68
score: 232.2
NoneNo IPR availableGENE3D2.40.10.10coord: 1192..1280
e-value: 3.0E-13
score: 52.0
NoneNo IPR availableGENE3D4.10.400.10coord: 1054..1117
e-value: 1.5E-7
score: 33.6
NoneNo IPR availableGENE3D2.40.10.10coord: 1281..1374
e-value: 3.0E-13
score: 52.0
NoneNo IPR availableGENE3D4.10.400.10coord: 1468..1507
e-value: 1.0E-7
score: 33.5
NoneNo IPR availableGENE3D4.10.400.10coord: 476..517
e-value: 1.8E-8
score: 36.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 225..262
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 241..257
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 225..239
NoneNo IPR availablePANTHERPTHR44049FAMILY NOT NAMEDcoord: 987..1118
coord: 390..514
coord: 1412..1530
coord: 677..911
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..83
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 84..105
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 106..1712
NoneNo IPR availableTMHMMTMhelixcoord: 84..106
IPR015420Peptidase S1A, nudelPFAMPF09342DUF1986coord: 1193..1285
e-value: 1.3E-10
score: 41.5
IPR023415Low-density lipoprotein (LDL) receptor class A, conserved sitePROSITEPS01209LDLRA_1coord: 1094..1116
IPR033116Serine proteases, trypsin family, serine active sitePROSITEPS00135TRYPSIN_SERcoord: 855..866
IPR018114Serine proteases, trypsin family, histidine active sitePROSITEPS00134TRYPSIN_HIScoord: 716..721
IPR001190SRCR domainPROSITEPS50287SRCR_2coord: 1117..1218
score: 9.149
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 660..912
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 1193..1359
IPR036055LDL receptor-like superfamilySUPERFAMILY57424LDL receptor-like modulecoord: 1080..1117
IPR036055LDL receptor-like superfamilySUPERFAMILY57424LDL receptor-like modulecoord: 1457..1496
IPR036055LDL receptor-like superfamilySUPERFAMILY57424LDL receptor-like modulecoord: 477..513
IPR036055LDL receptor-like superfamilySUPERFAMILY57424LDL receptor-like modulecoord: 1011..1053

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold310_size212938-snap-gene-1.20-mRNA-1maker-scaffold310_size212938-snap-gene-1.20-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk03976 ID=Tk03976|Name=Tk03976|organism=Tigriopus kingsejongensis|type=polypeptide|length=1712bp
MAVEGAEQHMRITGGEPEGVPSSICMGQSGRSSRSRPDGHFHLGRTMAVR
NEEESIAIPQTPLLSGRETMPGESRSRIFTRSRLICALTVIFVIVFLIAV
ILIAVRAGEGSHEEVLVEEQSHAQGATPGTEPPPCREIDPQTAQQTQDDI
NLTPEDLVKLRALLDMIHDPAAATNMIKQKQDELDEDTAKKELLVLLSDP
RKLEELVADLDEREQEKIRDTLEQYRSKLATSTPSSLDEELRTPKAAESR
RQSFLDDPFFDNDQSSGDFDSMNSFLNARTTTWSPKAPNPKTDAWNLLAR
IPAEEVSIETTTQAKTTKQDNIKNRRATDIFRVMESFQLPNDEDRIVTDQ
EFLNNSWQEPSDSQAGKVEYEELLSLADVAEATDMEDIDLQSVYARTGKA
AITSGLARSNGECAPEEEECADGNGCFLMDEKCDRIIHCADKSDENDCSC
RSYLSTDKICDEYPDCDNGEDESNCGCPLGQFNCGIETRCISEDKVCDNV
FDCENGLDEAECAALAPISGGLLNPNVTGSPYIDGLLYWKVGGGFHPLCV
DFPEPGLADDYFTMMAEDICDSLLPGMMSELPQINVISDLEKIGHFENVA
HLHLETVEKQSDENAKFPGGQFEFSLSPPDDHSVMVEIRCPTPRCGTRAS
VRPAVAAQPIPTEPTEVEGTTPAAVINDKIVGGSAADAKNWPAIVAIYRD
GDFICGGTIIDAEWVLTAAHCVENYKENQYYFDVLVGMLRKNSKSSLQYS
RKVVKVVVHEEFDSVYLKNDLAMIKVDKPFIFNAYAGLACMPEDATMSPQ
PDDVCFAAGWGNKREDRDPAEHLQEVQIPIMENCKKDYNNIEVQICGGRH
EGGIDSCQGDSGGPLFCQYPGDSSRWYLGGIISHGEGCARSDTPGVYTRA
FAYKEWVKEKLAEDASRAPGTGVELEPRMECPTHVCDGKCRKKHELCNRF
VDCMDQTDEMWCSKNNEDQIVFSPPSDHVPTHKTSPFVSERQSMERGVSY
HPIIHYTSSKTCKFDYFRCTTVHQCIPKTKTCDQVPDCVDFSDERDCNCL
AFLARKWPDRVCDGYPDCKSWEDERNCKFCSTPDSFYCDISKQCIPRHKV
CDTNADCKFKEDERYCFTLINTDSVFLQQDGRPRKQTKGVVAFSSKGLWA
ASCVQKWDGSLSDQICRYMGYKASITQTLHSSDSLPHLKGKVTIYKQGQY
LCGGTLVHQYWVLTSTACADQVNIKDGDYIIARAGGHREQFSLSAHDQLR
RVVQFTTIPGTSISMGFLSKSFNLNEYVNIVCIPSVTWVPVNRTCYLTGR
FNGVLNHAYETTVESVCDYISSRKYSFCTRQRIPTNECLENWSGALVCSD
KSGTYYAVGGYFSQNANCKFGQEPAPDRFETLVSKAAREGITSVIQSAQT
ANHPFENLRDDCDTLRCPLGRCLSPHEICDGVVHCSNMVDEDSILCANTI
RMCEKVNATHCECQSQDFMCGNGMCLDKTKFCNGVNDCGDNPSSDETPNC
KTCSVALKTLKPKSICDGHVDCLGKNDIGQDESATECCPGLQGPNRTMSG
EDPYRCVIGHLDPSSHSSNKISISDDCIPSSGVCDWDTNSTIPSCPNGAD
ELDCISIWPQYHVKDHPRDAFGRFISVPKGYLYFVAFGKKYLYCAGLQSF
KPSLLFAFGDVLCKYKGFRAVLSINLSEPQSRTRVAPNVPLTSEEQAHFE
ACQLVYLTCNQW
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002172LDrepeatLR_classA_rpt
IPR001254Trypsin_dom
IPR015420Peptidase_S1A_nudel
IPR023415LDLR_class-A_CS
IPR033116TRYPSIN_SER
IPR018114TRYPSIN_HIS
IPR001190SRCR
IPR009003Peptidase_S1_PA
IPR036055LDL_receptor-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0004252serine-type endopeptidase activity
GO:0005044scavenger receptor activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Add to Basket