Tk04552, Tk04552 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk04552
Unique NameTk04552
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length207
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.340.70coord: 7..85
e-value: 1.0E-12
score: 50.1
NoneNo IPR availablePANTHERPTHR24559FAMILY NOT NAMEDcoord: 26..190
NoneNo IPR availablePANTHERPTHR24559:SF222SUBFAMILY NOT NAMEDcoord: 26..190
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 98..203
e-value: 1.5E-14
score: 56.1
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 117..192
e-value: 1.1E-7
score: 31.9
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 98..207
score: 13.206
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 102..192

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold1843_size26594-processed-gene-0.5-mRNA-1snap_masked-scaffold1843_size26594-processed-gene-0.5-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk04552 ID=Tk04552|Name=Tk04552|organism=Tigriopus kingsejongensis|type=polypeptide|length=207bp
MTQGMHGPGLPLKIHEISLVDGLLVRDGHRVIVPPQAVSKILDLLHLSHS
GTVKMLQNAKALYFWPGMRQQVANLVSSCNTCASLLPSQAYEPSLKLTPT
GPMSDMATDLVKVTGTEETWLVLGDRWSGYPWVEKLSQLSSAAVISQLIR
WFDDFGDPERLRSDGGPQFRLEFGTFCEEQGIVWEKSSPYNCVAMVVLKR
QWQICSH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR001584Integrase_cat-core
IPR012337RNaseH-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: Biological Process
TermDefinition
GO:0015074DNA integration
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