Tk04737, Tk04737 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk04737
Unique NameTk04737
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length678
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003128Villin headpieceSMARTSM00153VHP_1coord: 643..678
e-value: 6.5E-14
score: 62.2
IPR003128Villin headpiecePFAMPF02209VHPcoord: 643..678
e-value: 5.4E-15
score: 55.1
IPR003128Villin headpiecePROSITEPS51089HPcoord: 613..678
score: 19.169
IPR001781Zinc finger, LIM-typeSMARTSM00132lim_4coord: 250..301
e-value: 8.4E-14
score: 61.9
coord: 309..362
e-value: 4.4E-8
score: 42.8
coord: 141..193
e-value: 4.4E-12
score: 56.1
coord: 82..133
e-value: 3.3E-9
score: 46.6
IPR001781Zinc finger, LIM-typePFAMPF00412LIMcoord: 251..306
e-value: 9.3E-13
score: 48.1
coord: 310..352
e-value: 4.7E-6
score: 26.6
coord: 83..138
e-value: 1.7E-8
score: 34.4
coord: 142..193
e-value: 3.7E-10
score: 39.8
IPR001781Zinc finger, LIM-typePROSITEPS00478LIM_DOMAIN_1coord: 310..344
IPR001781Zinc finger, LIM-typePROSITEPS00478LIM_DOMAIN_1coord: 142..175
IPR001781Zinc finger, LIM-typePROSITEPS50023LIM_DOMAIN_2coord: 309..369
score: 6.554
IPR001781Zinc finger, LIM-typePROSITEPS50023LIM_DOMAIN_2coord: 81..140
score: 12.524
IPR001781Zinc finger, LIM-typePROSITEPS50023LIM_DOMAIN_2coord: 141..200
score: 8.93
IPR001781Zinc finger, LIM-typePROSITEPS50023LIM_DOMAIN_2coord: 249..308
score: 13.514
NoneNo IPR availableGENE3D2.10.110.10coord: 235..307
e-value: 1.5E-22
score: 81.3
NoneNo IPR availableGENE3D2.10.110.10coord: 137..201
e-value: 8.3E-18
score: 66.2
NoneNo IPR availableGENE3D2.10.110.10coord: 76..136
e-value: 8.3E-12
score: 46.9
NoneNo IPR availableGENE3D2.10.110.10coord: 308..368
e-value: 1.6E-14
score: 55.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 531..545
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 495..522
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 486..556
NoneNo IPR availablePANTHERPTHR24213:SF9UNC-115A, ISOFORM Bcoord: 617..678
NoneNo IPR availablePANTHERPTHR24213:SF9UNC-115A, ISOFORM Bcoord: 82..422
NoneNo IPR availablePANTHERPTHR24213FAMILY NOT NAMEDcoord: 617..678
NoneNo IPR availablePANTHERPTHR24213FAMILY NOT NAMEDcoord: 82..422
NoneNo IPR availableCDDcd09329LIM3_abLIMcoord: 251..302
e-value: 4.2006E-29
score: 107.405
NoneNo IPR availableCDDcd09328LIM2_abLIMcoord: 139..194
e-value: 4.97436E-29
score: 107.432
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 249..276
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 109..171
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 337..364
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 277..340
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 166..195
IPR036886Villin headpiece domain superfamilyGENE3D1.10.950.10coord: 614..678
e-value: 2.6E-24
score: 86.7
IPR036886Villin headpiece domain superfamilySUPERFAMILY47050VHP, Villin headpiece domaincoord: 615..678

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold719_size106944-processed-gene-0.10-mRNA-1snap_masked-scaffold719_size106944-processed-gene-0.10-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk04737 ID=Tk04737|Name=Tk04737|organism=Tigriopus kingsejongensis|type=polypeptide|length=678bp
MVLQVWSGKQNPQSSDQAVDPHSHSSQPGSHRMPGSQATSPTGGTAANRN
EVVKTPTKKRGLSLFKSKLLGGGGSSSGGKTFCKTCKKKCSGEVLRVNEF
YFHAQCFCCKGCSKSLSQGGFFTKSGDYFCASCYQKNFGTKCARCGLYVE
GEVVTALGKTYHQNCFTCAGCREPFPTGERVTFTGKACLCQNCVKAGKDL
DNALEDLSNSIADIKTTKVAAPSSLNSSGTTNGRATKTATTTSGGRGDDT
CAGCREELRDGQALMALDKQYHVWCFKCQACNALLHGEYMGKDGHPYCER
DYQQQFGVKCTYCRRFISGKVLQAGDNNHFHPTCARCTKCGEPFGDGEEM
FLQGAAIWHPRCGPGPDENGGGVFISNGFESSGVDTMDRASMASGTYYGL
SRASSPGASLRYGSETPGGGHQSRAYSAGGGRFSRSTTHMPGWSPAYGGH
GLYSSSSTYSLRRPIEPGDRIGSLASINHFHVPAHARRGSSVSRHARESG
MNTPVHPQQSTEQLSSSQHHRPISCPPKPGYTHQTRASTLPTGYNRGMSP
GPGLSFNDDLVSQASFRTDVTDQAGGLMRGSSTYSHGFYPGTSRPLFNSG
RDTPTSAIPGAFDGDYKVYPLHMLFTNNYKMPPDVDRCNLEMHLSDADFE
MAFNMSRDNFRRLPPWRKNDMKKRVKLF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003128Villin_headpiece
IPR001781Znf_LIM
IPR036886Villin_headpiece_dom_sf
Vocabulary: Biological Process
TermDefinition
GO:0007010cytoskeleton organization
Vocabulary: Molecular Function
TermDefinition
GO:0003779actin binding
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