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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 192..212 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..32 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 9..23 |
| None | No IPR available | PANTHER | PTHR13064:SF6 | SUBFAMILY NOT NAMED | coord: 35..221 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 1..119 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 120..145 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 146..221 |
| None | No IPR available | TMHMM | TMhelix | | coord: 123..145 |
| IPR008853 | TMEM9 | PFAM | PF05434 | Tmemb_9 | coord: 76..220
e-value: 2.6E-49
score: 166.7 |
| IPR008853 | TMEM9 | PANTHER | PTHR13064 | FAMILY NOT NAMED | coord: 35..221 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk04839 ID=Tk04839|Name=Tk04839|organism=Tigriopus kingsejongensis|type=polypeptide|length=221bp
MVAVARNDGGLHEAEDDHAQQVEDIEGPSQVSSIEDAHHHNSRCVCKCPD
VEAFRQDFNRDFFPIQGTEKRRSVYVNSTVTPKMCNCEQVVLNLLNLTPS
EADGFCPRCKCNFEVRNLSIMKVVVILVIWVICILVIYMGFLTCLEPMMS
RKLPSINYREHHDTPETEEEDVETAEHLANGTPMRTYGSSVINRMENQQT
RWKRQVEEQRRNIYDRHSMLN back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
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| IPR008853 | TMEM9 |
Vocabulary: Cellular Component
| Term | Definition |
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| GO:0016021 | integral component of membrane |
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