Tk04880, Tk04880 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk04880
Unique NameTk04880
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length694
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000795Transcription factor, GTP-binding domainPRINTSPR00315ELONGATNFCTcoord: 75..85
score: 65.43
coord: 55..63
score: 70.82
coord: 9..22
score: 64.56
coord: 127..136
score: 46.35
IPR000795Transcription factor, GTP-binding domainPFAMPF00009GTP_EFTUcoord: 7..277
e-value: 3.4E-61
score: 206.1
IPR000795Transcription factor, GTP-binding domainPROSITEPS51722G_TR_2coord: 5..280
score: 72.347
IPR000640Elongation factor EFG, domain V-likeSMARTSM00838EFG_C_acoord: 596..683
e-value: 2.6E-45
score: 166.5
IPR000640Elongation factor EFG, domain V-likePFAMPF00679EFG_Ccoord: 597..681
e-value: 1.8E-27
score: 95.1
IPR005517Translation elongation factor EFG/EF2, domain IVSMARTSM00889EFG_IV_2coord: 476..594
e-value: 4.5E-61
score: 218.9
IPR005517Translation elongation factor EFG/EF2, domain IVPFAMPF03764EFG_IVcoord: 475..593
e-value: 7.5E-44
score: 148.3
IPR005517Translation elongation factor EFG/EF2, domain IVCDDcd01434EFG_mtEFG1_IVcoord: 479..594
e-value: 1.74986E-60
score: 196.118
IPR004540Translation elongation factor EFG/EF2TIGRFAMTIGR00484TIGR00484coord: 2..688
e-value: 6.5E-290
score: 961.1
IPR004540Translation elongation factor EFG/EF2HAMAPMF_00054_BEF_G_EF_2_Bcoord: 3..687
score: 102.719
IPR004161Translation elongation factor EFTu-like, domain 2PFAMPF03144GTP_EFTU_D2coord: 320..387
e-value: 1.1E-14
score: 54.5
NoneNo IPR availableGENE3D3.30.70.240coord: 600..670
e-value: 1.8E-81
score: 274.4
NoneNo IPR availableGENE3D3.30.70.870coord: 429..479
e-value: 1.4E-21
score: 78.2
NoneNo IPR availableGENE3D2.40.30.10coord: 296..412
e-value: 8.2E-41
score: 140.6
NoneNo IPR availableGENE3D3.40.50.300coord: 2..291
e-value: 1.5E-102
score: 345.1
NoneNo IPR availablePFAMPF14492EFG_IIcoord: 400..474
e-value: 1.2E-28
score: 98.9
NoneNo IPR availablePANTHERPTHR43261:SF5SUBFAMILY NOT NAMEDcoord: 1..693
NoneNo IPR availablePANTHERPTHR43261FAMILY NOT NAMEDcoord: 1..693
NoneNo IPR availableCDDcd04088EFG_mtEFG_IIcoord: 307..388
e-value: 2.38358E-34
score: 123.401
NoneNo IPR availableCDDcd01886EF-Gcoord: 9..279
e-value: 2.85962E-172
score: 490.851
IPR014721Ribosomal protein S5 domain 2-type fold, subgroupGENE3D3.30.230.10coord: 671..683
e-value: 1.8E-81
score: 274.4
coord: 480..599
e-value: 1.8E-81
score: 274.4
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 8..174
e-value: 1.4E-25
score: 87.9
IPR031157Tr-type G domain, conserved sitePROSITEPS00301G_TR_1coord: 48..63
IPR035649EFG, domain VCDDcd03713EFG_mtEFG_Ccoord: 599..676
e-value: 3.45488E-39
score: 136.889
IPR009022Elongation factor G, domain IIICDDcd16262EFG_IIIcoord: 401..476
e-value: 1.53658E-35
score: 126.416
IPR035647EF-G domain III/V-likeSUPERFAMILY54980EF-G C-terminal domain-likecoord: 400..477
IPR035647EF-G domain III/V-likeSUPERFAMILY54980EF-G C-terminal domain-likecoord: 599..688
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 475..595
IPR009000Translation protein, beta-barrel domain superfamilySUPERFAMILY50447Translation proteinscoord: 261..398
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..278

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold1_size3401120-processed-gene-11.27-mRNA-1snap_masked-scaffold1_size3401120-processed-gene-11.27-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk04880 ID=Tk04880|Name=Tk04880|organism=Tigriopus kingsejongensis|type=polypeptide|length=694bp
MTDLTLYRNIGIFAHVDAGKTTTTERILKLTGKIHKIGEVHDGAATTDFM
DQEQERGITIQSAATTAFWKDHRMNIIDTPGHVDFTIEVYRSLKVLDGGV
GVFCASGGVEPQSETNWRYANESKVARIIFVNKLDRMGGDFYRVVKQVED
VLAARPVVMTLPIGIEDDFVGVVDVLTRKAWVWDSSGDPMNYEIQDVPAD
MVDKVEEYRVAMIETALEMDDDLLEKYLEGEEPTEEQIKACLRKGTREIA
FFPTFCGSAFKNKGVQLVLDGVVDYLPNPVEVNPQPEVDLEGEPTGEFAI
VDPAGPFRALAFKIMDDRYGALTFTRIYSGKITKGDSVLNTFTGKTERIG
RMVEMHADTREEIDSCQAGDIVAFVGLKNVQTGHTLADIKNPATLEPMVF
PDPVISIAIAPKDKAGAEKMGIAIGKMVQEDPSFRVETDEDSGETIIKGM
GELHLDIKVDILRRTHGVDVEVGKPQVAYRETITKEVEDSYTHKKQTGGS
GQFAKIDYKVEPAEKGEGFVFESKVTGGNVPREFWPAIDKGFRTSMVEGV
LAGFPCLDVKVTLLDGGFHAVDSSAIAYEIAARAAYRYSLPKAGPQLIEP
IMKVDVFTPDDHVGDVIGDLNRRRGMISGQDSGPTGVRVKATCPLSEMFG
YIGDLRTMTSGRGQFSMEFDHYAPCPTNVAEAVIAETKERKANK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000795TF_GTP-bd_dom
IPR000640EFG_V-like
IPR005517Transl_elong_EFG/EF2_IV
IPR004540Transl_elong_EFG/EF2
IPR004161EFTu-like_2
IPR014721Ribosomal_S5_D2-typ_fold_subgr
IPR005225Small_GTP-bd_dom
IPR031157G_TR_CS
IPR035649EFG_V
IPR009022EFG_III
IPR035647EFG_III/V
IPR020568Ribosomal_S5_D2-typ_fold
IPR009000Transl_B-barrel_sf
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
GO:0003746translation elongation factor activity
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0006414translational elongation
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