Tk05213, Tk05213 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk05213
Unique NameTk05213
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length625
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 379..406
e-value: 0.93
score: 18.5
coord: 340..365
e-value: 5.4
score: 15.6
coord: 412..436
e-value: 0.0083
score: 25.3
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 414..436
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 342..365
NoneNo IPR availableGENE3D3.30.160.60coord: 413..438
e-value: 4.3E-7
score: 31.8
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 418..436
e-value: 0.015
score: 15.6
NoneNo IPR availableGENE3D3.30.160.60coord: 334..412
e-value: 3.6E-14
score: 55.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 604..625
NoneNo IPR availablePANTHERPTHR19818:SF80ZINC FINGER PROTEIN AEBP2coord: 264..599
NoneNo IPR availablePANTHERPTHR19818ZINC FINGER PROTEIN ZIC AND GLIcoord: 264..599
NoneNo IPR availableSIGNALP_GRAM_POSITIVESignalP-TMSignalP-TMcoord: 1..42
score: 0.451
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 340..368
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 398..437

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold408_size180710-processed-gene-0.13-mRNA-1snap_masked-scaffold408_size180710-processed-gene-0.13-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk05213 ID=Tk05213|Name=Tk05213|organism=Tigriopus kingsejongensis|type=polypeptide|length=625bp
MSSVSLPPPPVKMPSLGSTTATSQCCPKKTVLNVTQQTTALALPSPTGSS
SETSDYQRSTPSPRDEQDSGIGSLEEWSPESQPSRDETDLGFSEDLKEPL
VPSLAVKSESADDLGPLKPDSTHIDPRLMLQQVRVALEKMPNLEKLKNVN
DVPSTATSLSESCMKVLKRRHSDAPIEPNADVKKIKLEEESLPSQGKITS
YMSETKHFTALRKEKLDRILNLKTEEITPAPLPAPTIPTKLDPEHHQNKN
DLYLISQLKQLKDAKKADQLSSCLQSSLACNSNTSSSSVPQDLKSNNSSS
VGSSTIGKAKDNNDCFEVPRSTIRFPLTKPSTPSSPRNTTPCKWKGCGED
LESTGKLIDHLKAFHVDCQNVEGNDEFQYKCLWEGCKVHGKSSSSRTWLE
KHIMSHGGNKPFQCIVDGCKMRFSTQSLLERHVNGHFKCINPSSNQAHSG
PSSNFSGSARHKSHDASSGSSTPLTSIVKSMRKAGRKLKYRQTIYSARIF
DLFDLGMMAKMQEQIARLHCVCEKDLNISLQRNEITLEGEVVARKKDLST
GETMVLQSWKPDNFLPDEWTPLKSMETTKTLKLTSLPQSAKAFLSSQIQL
QTNNEDTHLSRRKTRFPQQSSSALS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
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