Tk05484, Tk05484 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk05484
Unique NameTk05484
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length306
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 277..299
e-value: 0.15
score: 21.2
coord: 221..243
e-value: 0.0032
score: 26.7
coord: 193..215
e-value: 0.011
score: 24.9
coord: 249..271
e-value: 0.025
score: 23.7
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 195..215
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 251..271
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 223..243
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 193..220
score: 14.69
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 277..299
score: 10.887
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 249..276
score: 14.295
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 221..248
score: 16.186
NoneNo IPR availableGENE3D3.30.160.60coord: 246..272
e-value: 3.1E-14
score: 54.5
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 221..243
e-value: 0.0023
score: 18.2
coord: 249..271
e-value: 7.8E-4
score: 19.7
coord: 193..215
e-value: 2.4E-5
score: 24.4
NoneNo IPR availablePFAMPF13894zf-C2H2_4coord: 277..300
e-value: 0.0015
score: 19.1
NoneNo IPR availableGENE3D3.30.160.60coord: 191..222
e-value: 6.8E-11
score: 43.8
NoneNo IPR availableGENE3D3.30.160.60coord: 273..305
e-value: 3.0E-7
score: 32.1
NoneNo IPR availableGENE3D3.30.160.60coord: 223..245
e-value: 7.3E-12
score: 47.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..166
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..185
IPR037044Zinc finger protein Gfi-1bPANTHERPTHR44643FAMILY NOT NAMEDcoord: 188..301
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 230..286
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 191..243

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold491_size156641-snap-gene-0.32-mRNA-1maker-scaffold491_size156641-snap-gene-0.32-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk05484 ID=Tk05484|Name=Tk05484|organism=Tigriopus kingsejongensis|type=polypeptide|length=306bp
LLKPGHLPEGPAHSGSPLMPWFLSPLMGLPVSASGPESLSSRLAPCFYPF
PERGLVPLPTSPLLSLSAAHFSIQSFLAQRLLLDAKTSALEPTHPVVDDS
PSTLDADGDGRLKAHEDLLSRVRPNGQSCELEHAHSQDNNNIRVVKDLNR
SLSAQSSPSSPHVSHPQDAPESIDESRGSPSLLPRITKEKRNFKCGQCGK
CFKRSSTLSTHLLIHSDTRPFPCQYCGKRFHQKSDMKKHTYIHTGEKPHQ
CVVCCKSFSQSSNLITHMRKHSGYKPFACQSCEKRFQRKVDLRRHTEAHH
SWNVSI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR037044Gfi-1b
IPR036236Znf_C2H2_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
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