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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | GENE3D | 1.10.287.70 | | coord: 52..200
e-value: 2.7E-36
score: 126.6 |
| None | No IPR available | PANTHER | PTHR18966 | IONOTROPIC GLUTAMATE RECEPTOR | coord: 102..200 |
| None | No IPR available | PANTHER | PTHR18966:SF352 | GLUTAMATE RECEPTOR FAMILY AMPA | coord: 102..200 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 168..201 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 146..167 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 127..145 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 108..126 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 1..107 |
| None | No IPR available | TMHMM | TMhelix | | coord: 145..167 |
| IPR001320 | Ionotropic glutamate receptor | PFAM | PF00060 | Lig_chan | coord: 102..184
e-value: 1.8E-35
score: 121.9 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk05734 ID=Tk05734|Name=Tk05734|organism=Tigriopus kingsejongensis|type=polypeptide|length=201bp
MSISAQTIWLELTLPTGGSLVVGGIYRQWSSPSSSLTGMAMEREQLDVIT
TQIKISPYERGVDALIVGRTDEKGYRLARPDPMYETLFTGNGRPVRTIGT
QSQQSEDAHDAFTLMNSFWFMIASLLQQGTDLLPRAISTRMVAGMWWFFT
LIMISSYTANLAAFLTVERMDSPIESAEDLSKQHSIKYGCLQGGSTASFF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR001320 | Iontro_rcpt |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Molecular Function
| Term | Definition |
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| GO:0004970 | ionotropic glutamate receptor activity |
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