Tk05812, Tk05812 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk05812
Unique NameTk05812
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length608
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 569..591
e-value: 0.034
score: 23.3
coord: 513..535
e-value: 0.013
score: 24.7
coord: 541..563
e-value: 0.001
score: 28.3
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 543..563
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 571..591
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 515..535
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 513..540
score: 14.96
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 569..596
score: 13.048
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 541..568
score: 15.771
NoneNo IPR availableGENE3D3.30.160.60coord: 503..538
e-value: 2.2E-10
score: 41.9
NoneNo IPR availableGENE3D3.30.160.60coord: 539..563
e-value: 8.8E-13
score: 49.8
NoneNo IPR availablePFAMPF13912zf-C2H2_6coord: 541..565
e-value: 3.0E-5
score: 23.8
NoneNo IPR availableGENE3D3.30.160.60coord: 564..608
e-value: 4.8E-12
score: 47.8
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 513..535
e-value: 1.7E-4
score: 21.8
coord: 569..591
e-value: 0.0036
score: 17.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..50
NoneNo IPR availablePANTHERPTHR14196ODD-SKIPPED - RELATEDcoord: 344..608
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 510..570
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 563..607

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold716_size107355-snap-gene-0.21-mRNA-1maker-scaffold716_size107355-snap-gene-0.21-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk05812 ID=Tk05812|Name=Tk05812|organism=Tigriopus kingsejongensis|type=polypeptide|length=608bp
MELDFSLDTSIDEGDDDPQSKEVSNEASENSDVPNEPKKGTRKVKKSTKA
ALVDQANIRAKTRLKVENINRDYKGKVATARYTTSHLLLGLQLRETRRRF
KLFKRQSPSASSFKKASTAFKHSLNALQVAINGARQETCMGKVFAKDGDE
VATFIEGNDTRDPYLADCCDFAVKELKKIQVESFFLKRRAGLSNLNELTV
HAVAMETWRAFHSQDGPSGSRNALGQVLFPSNDATRSTSLSEAAGVVSPL
LPYAALLPYAPGGQRNRHVEQVPSPARSQYQADGFERGQINIKIRIYSTW
IIHLKVIPIPLMDNKPSSVSTNSEDIHIRVSTTLSSPVVDMLQIHYPAAF
MAATQFPNGAHAHMTKLVREAGERSAFSQVATTSHKPVGALDQSDVPTTR
SKFDFAHLASSASSSSVNPVIPNFNPHLRDGLYGEKLALHNNLNGTVLPR
LGVGPYAAAAAAAAAGLPLLMRHWLGAAAAAASTGLPPTYPSSGYDPRLL
RGHGRSSRPKKRFICKYCNREFTKSYNLLIHERTHTDERPFNCDICGKAF
RRQDHLRDHRYIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEDSPHRCP
ICQRHFNQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
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