Tk06159, Tk06159 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk06159
Unique NameTk06159
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length762
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 670..693
e-value: 0.022
score: 23.9
coord: 642..664
e-value: 0.0022
score: 27.3
coord: 709..732
e-value: 0.83
score: 18.7
coord: 614..636
e-value: 0.011
score: 25.0
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 644..664
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 672..693
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 616..636
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 670..693
score: 10.679
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 614..641
score: 11.344
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 642..669
score: 15.376
NoneNo IPR availableGENE3D3.30.160.60coord: 598..662
e-value: 2.5E-13
score: 51.9
NoneNo IPR availableGENE3D3.30.160.60coord: 663..736
e-value: 5.3E-11
score: 44.5
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 642..664
e-value: 8.7E-4
score: 19.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 464..533
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 481..509
IPR027756Ovo-likePANTHERPTHR10032ZINC FINGER PROTEIN WITH KRAB AND SCAN DOMAINScoord: 608..748
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 636..688
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 612..645

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold40_size501252-snap-gene-1.8-mRNA-1maker-scaffold40_size501252-snap-gene-1.8-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk06159 ID=Tk06159|Name=Tk06159|organism=Tigriopus kingsejongensis|type=polypeptide|length=762bp
LASRKAYDEPIDVVIRRKESERYHPYNRSASAATEPVQDVPINLQIPRTT
VSPPPQSEPVDFSTKKEPKVASEAESKPKNISFTSSKELRFSKNLKLLLV
EIFRNHPEKSRMIIDYIRHVSRKKDPHNDERASPTSEVNTISQQNTNHGP
QARSPAPMKGHSGGSEGPGGSPGSSSGNSEFGSESNNNNSHGSMNNNNNN
HHHHHNHFHKKLLGKGGPGGGSDPETGFDDINIESLDFGDLPESNTNKWF
TEHPDINPAKVFDGINLKTEFPYPTDSKVEKPPDLTNLDNATANLLQMSV
PDPSTTFLDIGTDSSMYEDDPFNIEQLLPSNFNINQLDMGANATEQAMLA
HGTENSVNLAIGSSAKPIHLQPNHGHLGGHHHPVVSQHNGLHLKPHPHPF
PMHPPPHHLPPPPSIQTTASSIGLSLYPETTIRPVHIPHHHHHENMQANL
RSFIKSEPLPCIKREESSHPHEGMDTPYDRSSGMSPMSSMDSIGSPGSPP
SSSSLPLFASPHSRIPLPGSSGSMGGGHGHSNAHLSQMARKKAVGQEDED
LINIPSLQVRIKILQQRLGLTHETPVEIINGGHGIKNPLASDSPEALKLE
KLPAVRPESDPSKFQCRICSKIFKLQRLLNRHMKCHSDVKRYLCTFCGKG
FNDTFDLKRHTRTHTGVRPYKCNLCEKSFTQRCSLESHCLKVHGVTHNYE
YKQRRSKMYVCEDCGFTTKEPELHYLHLKEKHPYSPALLKFYDKRHFKFN
NSGFASMLLQVN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR027756Ovo-like
IPR036236Znf_C2H2_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
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