Tk06171, Tk06171 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk06171
Unique NameTk06171
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length380
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 41..61
NoneNo IPR availablePIRSFPIRSF002394GNBP_Bcoord: 31..380
e-value: 1.1E-149
score: 495.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..40
NoneNo IPR availablePANTHERPTHR19850:SF36GUANINE NUCLEOTIDE-BINDING PROTEIN SUBUNIT BETA-5coord: 37..380
NoneNo IPR availableCDDcd00200WD40coord: 85..380
e-value: 3.76036E-81
score: 248.019
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 107..121
score: 39.84
coord: 239..253
score: 35.16
coord: 195..209
score: 38.84
IPR001632G-protein, beta subunitPRINTSPR00319GPROTEINBcoord: 88..104
score: 48.31
coord: 107..121
score: 77.37
coord: 126..141
score: 53.41
coord: 144..161
score: 64.48
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 169..208
e-value: 0.033
score: 23.3
coord: 341..380
e-value: 4.2E-7
score: 39.6
coord: 123..162
e-value: 0.19
score: 20.8
coord: 81..120
e-value: 9.7E-10
score: 48.4
coord: 211..252
e-value: 8.0E-7
score: 38.7
coord: 303..338
e-value: 0.49
score: 18.9
coord: 255..294
e-value: 8.8E-8
score: 41.9
IPR001680WD40 repeatPFAMPF00400WD40coord: 347..379
e-value: 3.2E-6
score: 27.7
coord: 212..252
e-value: 0.002
score: 18.8
coord: 85..120
e-value: 1.8E-6
score: 28.5
coord: 312..338
e-value: 0.14
score: 13.0
coord: 257..294
e-value: 2.1E-5
score: 25.1
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 176..217
score: 10.943
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 218..261
score: 11.945
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 88..129
score: 13.583
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 348..380
score: 14.92
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 313..338
score: 8.938
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 262..303
score: 13.316
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 33..380
e-value: 5.5E-132
score: 441.7
IPR016346Guanine nucleotide-binding protein, beta subunitPANTHERPTHR19850GUANINE NUCLEOTIDE-BINDING PROTEIN BETA G PROTEIN BETAcoord: 37..380
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 107..121
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 195..209
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 325..339
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 88..380
score: 56.579
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 42..379

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold40_size501252-snap-gene-4.16-mRNA-1maker-scaffold40_size501252-snap-gene-4.16-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk06171 ID=Tk06171|Name=Tk06171|organism=Tigriopus kingsejongensis|type=polypeptide|length=380bp
MSSSAGAHGGGGGGGGGDHANANSGGGGGGGAQPPTEEPSIEDLQREIEH
LKRKIAEERAKLCDKTTAQVADGLEPIQGLNIKVRRSLKGHNAKVLCLDW
CSDKRHLVSSSQDGKLIVWDAFTTNKEHAVTMPTTWVMACAYGPSGNVVA
CGGLDNKVTVYPLTLDEDVATKKKTVGTHTSYMSCCLFPGSDNQVLTGSG
DATCALWDVESGQVLQSFHGHSADVMSVDLAPGPNPNTFVSGSCDKMAFV
WDMRTGNYVQYFEGHESDINAVKFHPSGDAIGTGSDDATCRLFDLRADRE
VAKYTKESILFGVNAIDFSTSGRILFAGYNDYAVNMWDTLKTHRIAMLYG
HENRVSSLKCSPDGTAIATGSWDYSLKIWA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001632Gprotein_B
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR016346Guanine_nucleotide-bd_bsu
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
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