Tk06209, Tk06209 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk06209
Unique NameTk06209
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length612
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 461..503
e-value: 3.9E-6
score: 36.4
coord: 330..369
e-value: 0.023
score: 23.9
coord: 543..582
e-value: 1.3E-7
score: 41.2
coord: 372..409
e-value: 1.7
score: 15.6
coord: 413..452
e-value: 6.7E-9
score: 45.6
IPR001680WD40 repeatPFAMPF00400WD40coord: 547..582
e-value: 8.7E-4
score: 20.0
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 337..378
score: 9.138
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 420..461
score: 15.922
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 550..582
score: 14.017
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 240..585
e-value: 2.0E-122
score: 410.4
IPR024977Anaphase-promoting complex subunit 4, WD40 domainPFAMPF12894ANAPC4_WD40coord: 334..393
e-value: 1.2E-5
score: 25.4
coord: 411..480
e-value: 2.4E-7
score: 30.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..174
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..192
NoneNo IPR availableCDDcd00200WD40coord: 321..582
e-value: 7.03611E-41
score: 148.252
IPR033010The WD repeat Cdc20/Fizzy familyPANTHERPTHR19918CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATEDcoord: 146..607
IPR033187Cell division cycle protein 20 homologuePANTHERPTHR19918:SF3CELL DIVISION CYCLE PROTEIN 20 HOMOLOGcoord: 146..607
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 490..504
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 321..591
score: 30.611
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 283..583

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold388_size188554-snap-gene-0.19-mRNA-1maker-scaffold388_size188554-snap-gene-0.19-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk06209 ID=Tk06209|Name=Tk06209|organism=Tigriopus kingsejongensis|type=polypeptide|length=612bp
KSKLSHNTSVLWLNWILPHDSLFRPHWTHCARVADWLTLEPGTHPRISRP
SSDSVHPACSMAQWKLDAELASLSRMAMPLQSHGRKHRTPTAHPVGSTLN
QSATNLSGLGSSAAGRLNSSRPHNSSGSSRMAAGSHAGLSACLNLAGPGS
KRLSESIRKTPSKTVRHSPGRKENITPGRHTPGGSDRFIPNRSGNDFELG
HFRLLKGAQDADGEATMSPSKRDFQRQMSEVLAEGGELDQSSRILSYTQK
APQAPDTHSNGLKVLYSQAKTPASLAKKSMRHIPQVPERILDAPDILNDY
YLNLIDWSVNNHLAVALGPYIYLWNAASGEIQQLCEMENPEDYVCSVKWI
KEGNCLAVGNATGEVALWDVENLKRIRLMPGHTDRIGSLSWNSYVISSGS
RSGRIQHSDVRVAEHQVAQIEAHSQEVCGLAWSPDGKLLASGGNDNILNV
WSAERGECFATNTPKYSFTQHQAAVKALAWCPWQPNVLASGGGTADRTIR
IWNCNNGTSLHSVCALLWSKEYRELVSSHGFANNEISIWKYPTMTKVAEL
LGHTERVLHMSMSPDGSTIVSAGADETLRLWKCFQLDPMKKKKEIQAKSG
EGSKLISRAGIR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR024977Apc4_WD40_dom
IPR033010Cdc20/Fizzy
IPR033187CDC20
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0010997anaphase-promoting complex binding
GO:0097027ubiquitin-protein transferase activator activity
Vocabulary: Biological Process
TermDefinition
GO:0031145anaphase-promoting complex-dependent catabolic process
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