Tk07678, Tk07678 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk07678
Unique NameTk07678
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length861
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003961Fibronectin type IIISMARTSM00060FN3_2coord: 327..408
e-value: 9.1
score: 11.8
coord: 424..508
e-value: 2.3
score: 17.1
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 326..421
score: 12.663
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 426..521
score: 13.846
IPR003961Fibronectin type IIICDDcd00063FN3coord: 332..418
e-value: 2.66198E-6
score: 44.4095
IPR003961Fibronectin type IIICDDcd00063FN3coord: 431..516
e-value: 2.68584E-7
score: 47.1059
IPR003599Immunoglobulin subtypeSMARTSM00409IG_3ccoord: 103..183
e-value: 1.3E-14
score: 64.5
coord: 9..94
e-value: 2.8E-8
score: 43.5
coord: 194..287
e-value: 1.8E-6
score: 37.5
IPR003598Immunoglobulin subtype 2SMARTSM00408igc2_5coord: 200..276
e-value: 7.5E-7
score: 38.8
coord: 15..82
e-value: 6.3E-8
score: 42.3
coord: 109..172
e-value: 1.8E-14
score: 64.1
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 98..185
e-value: 9.9E-23
score: 82.3
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 1..97
e-value: 2.8E-20
score: 74.3
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 414..520
e-value: 9.5E-14
score: 53.3
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 186..289
e-value: 7.0E-19
score: 69.7
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 310..413
e-value: 1.3E-16
score: 62.4
NoneNo IPR availablePFAMPF13927Ig_3coord: 185..273
e-value: 2.3E-14
score: 53.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 763..861
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 763..784
NoneNo IPR availablePANTHERPTHR44096FAMILY NOT NAMEDcoord: 1..289
coord: 313..574
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..540
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 541..564
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 565..861
NoneNo IPR availableCDDcd00096Igcoord: 205..283
e-value: 6.65655E-14
score: 64.956
NoneNo IPR availableTMHMMTMhelixcoord: 541..563
IPR013098Immunoglobulin I-setPFAMPF07679I-setcoord: 97..182
e-value: 1.6E-17
score: 63.3
coord: 5..93
e-value: 3.3E-11
score: 43.0
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 3..92
score: 11.606
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 97..181
score: 12.531
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 185..285
score: 12.695
IPR036179Immunoglobulin-like domain superfamilySUPERFAMILY48726Immunoglobulincoord: 5..101
IPR036179Immunoglobulin-like domain superfamilySUPERFAMILY48726Immunoglobulincoord: 95..192
IPR036179Immunoglobulin-like domain superfamilySUPERFAMILY48726Immunoglobulincoord: 180..288
IPR036116Fibronectin type III superfamilySUPERFAMILY49265Fibronectin type IIIcoord: 334..516

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold156_size297567-snap-gene-1.38-mRNA-1maker-scaffold156_size297567-snap-gene-1.38-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk07678 ID=Tk07678|Name=Tk07678|organism=Tigriopus kingsejongensis|type=polypeptide|length=861bp
LNEEFRLVPSSTDVVRGEDVKLECAPPRGVPSPVVKWKKDGKYLDLTSSK
RIKIDESGNLAIYQADLDDGGRYECSGENLAATRVSSPVRLTIIEPPSFA
VRPKSVSVLAGEDALLECRVEGVPLPDITWSKTDGVISAAKVKIIPRRGL
RIKHVHPSDEGEYVCTAQNGGGLATASAHLKVHAPPVITVPPESHSQVSV
GAERVVLACLVVGTPAPMVYWVKEDGSSDEVYFSTNLSPYPSSGDIKVNG
DGSLEIINPQVSHSGHYTCSATNEVGSALARANLRVYDFEDTATDSALLE
DENQLFNMDHESSSDRHEARLAMGHLETTLSELEVVGPKALKVVWKTSED
SPLVQGYRIWFKPQNERDSAFDFIQVPHVAMKSFVIKRLEENTNYHVFVQ
PFYKDVIGRASQMMSVSTPMDLPSQAPVIKEARLLNASSIFLSWDGIPVN
HHNGPLLGYEIIISGNSTYVNNTVQPASIHQVTLFVQGMVAHKIYSIQIG
VVNEMGRGPLSEPLEIELDPLFLYGMSSTLTPVYDQAANQVTLVIIVIAI
CSFVLILLSGVLFYKRKMGKGGSENKRDGYLEAATTCATDEYYHRQIARS
THGGSKAGGLWIDRKEEAKLYEKNLLAQPNHYHTRLNSNSDTEYTYVENN
KHNNSQQFATSSSGASHHTAESPEPYATTDIIKGRGYAIPIPVMNYSRTH
AQGHKTNNASCENLRYKRIHQQQAGNILDFIPPPPPNHPPPSTRYNASQE
SVISPKYLFNHPIYQSTSSPLDNQVTPNGSSKSHHRIHPSQRYGGKQSGD
NDAFTRLLPRDTSPVGSGSTGPRVDPDLDHELQHFSEAVSKFSGSPQRQS
EDDEADSLDLN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003961FN3_dom
IPR003599Ig_sub
IPR003598Ig_sub2
IPR013783Ig-like_fold
IPR013098Ig_I-set
IPR007110Ig-like_dom
IPR036179Ig-like_dom_sf
IPR036116FN3_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
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