Tk07815, Tk07815 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk07815
Unique NameTk07815
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length892
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 563..583
NoneNo IPR availableGENE3D3.40.50.300coord: 29..263
e-value: 1.4E-76
score: 259.0
NoneNo IPR availableGENE3D3.40.50.300coord: 276..490
e-value: 8.5E-36
score: 125.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 858..892
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 858..873
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 33..691
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 839..856
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 857..892
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..838
NoneNo IPR availableCDDcd00268DEADccoord: 59..261
e-value: 4.95022E-91
score: 284.377
IPR012541DBP10, C-terminalSMARTSM01123DBP10CT_2coord: 682..741
e-value: 8.0E-24
score: 95.2
IPR012541DBP10, C-terminalPFAMPF08147DBP10CTcoord: 682..740
e-value: 2.0E-19
score: 69.5
IPR012541DBP10, C-terminalPRODOMPD024971coord: 672..784
e-value: 5.0E-15
score: 204.0
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 313..394
e-value: 1.2E-20
score: 84.6
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 284..394
e-value: 3.4E-21
score: 75.6
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 287..433
score: 17.216
IPR001650Helicase, C-terminalCDDcd00079HELICccoord: 282..402
e-value: 2.14633E-29
score: 111.561
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 76..271
e-value: 1.3E-58
score: 210.7
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 88..260
score: 31.93
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 81..244
e-value: 1.4E-48
score: 164.9
IPR033517DDX54/DBP10 familyPANTHERPTHR24031:SF292ATP-DEPENDENT RNA HELICASE DDX54coord: 33..691
IPR000629ATP-dependent RNA helicase DEAD-box, conserved sitePROSITEPS00039DEAD_ATP_HELICASEcoord: 206..214
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 57..85
score: 9.857
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 53..261
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 198..414

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold204_size260821-snap-gene-1.35-mRNA-1maker-scaffold204_size260821-snap-gene-1.35-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk07815 ID=Tk07815|Name=Tk07815|organism=Tigriopus kingsejongensis|type=polypeptide|length=892bp
LWWIAVSIAEVHVVVPTSSMGPTMTNTEGDDMNVGEDEGRVFQALISQQN
KKKKKSGGFQSMGLDQDVFRAIIKKGYRVPTPIQRKSIPIILSGRDAVAM
ARTGSGKTAAFLIPLFQRLKARTAKVGARALILSPTKELALQTLKFTRDL
GRFTGLKAVCILGGESMEKQFAQMHENPDIIVATPGRLVHLSVEMSLKLT
SVEYVVFDEADRLFEMGFGEQLSEILARLPENRQTLLFSATLPKLLLEFT
KAGLADPVLIRLDTDTKIPDTLKMAFFSCRAEGKPAILLHLLRHVMAPGQ
QTVIFAATRHHVEYLHGLLDRANISNTFMHSHLDPTARKINTAKFQARRT
HVLIVTDVAARGIDIPLLDNVINYNFPPRPKLFVHRVGRVARAGRIGTSY
SLVAGDEFAYFIDLQLFLGSNVNTFPLNVTQACTEYHNFLGVVPQNVYDE
SADQIQDWHEDKSELSDLKRMAENGYKQYLKSRPGASSESIRRAKGMKGM
KFGPHPLLLDQQVDANEAKKTNFLQAMKKYRPPTTVFEIGATNKSSQVQG
VMTKKRQIHAKAINKFRDKNAETQLVASDAENNEFEPENIPEVEEKSSGP
ALEESNQDEIEATFRKVVQPKMRREYSVFQTKKRIAEKKLFSKNKKDDEN
FIGYQAQDHHQEAGYSLVNNNFENQAAGAVLDLTGDDNASMRAKKNAMRW
DNKKKKYVRADLNDKKKIKTESGVWIPASYKSNRYAKWKERSKLNFMDES
GQDGGHDHADNERSGSSHGGNRKRKPAQGLPEDHPAMKKARDSIPKFKRG
IKNEIKRPEEILKQRKLDEKKRAKNTKKKKGGKGKGRKRWALCLAVFLSL
ISFARLSPDSQSTGLSDGGSSRDTQVDIADLLDPLPEISDIS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012541DBP10_C
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR033517DDX54/DBP10
IPR000629RNA-helicase_DEAD-box_CS
IPR014014RNA_helicase_DEAD_Q_motif
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0004004ATP-dependent RNA helicase activity
GO:0003723RNA binding
GO:0005524ATP binding
GO:0003676nucleic acid binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
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