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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| IPR014001 | Helicase superfamily 1/2, ATP-binding domain | SMART | SM00487 | ultradead3 | coord: 486..654
e-value: 7.1E-12
score: 55.5
coord: 148..347
e-value: 1.9E-38
score: 143.7 |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain | PROSITE | PS51192 | HELICASE_ATP_BIND_1 | coord: 162..332
score: 22.7 |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain | PROSITE | PS51192 | HELICASE_ATP_BIND_1 | coord: 497..639
score: 17.199 |
| IPR001650 | Helicase, C-terminal | SMART | SM00490 | helicmild6 | coord: 384..472
e-value: 3.2E-27
score: 106.4
coord: 691..779
e-value: 3.2E-27
score: 106.4 |
| IPR001650 | Helicase, C-terminal | PFAM | PF00271 | Helicase_C | coord: 676..779
e-value: 3.8E-25
score: 88.3
coord: 369..472
e-value: 3.8E-25
score: 88.3 |
| IPR001650 | Helicase, C-terminal | PROSITE | PS51194 | HELICASE_CTER | coord: 360..513
score: 20.498 |
| IPR001650 | Helicase, C-terminal | PROSITE | PS51194 | HELICASE_CTER | coord: 667..823
score: 20.851 |
| IPR001650 | Helicase, C-terminal | CDD | cd00079 | HELICc | coord: 343..480
e-value: 1.35334E-33
score: 123.502 |
| IPR001650 | Helicase, C-terminal | CDD | cd00079 | HELICc | coord: 650..787
e-value: 1.35334E-33
score: 123.502 |
| None | No IPR available | GENE3D | 3.40.50.300 | | coord: 649..824
e-value: 4.2E-47
score: 161.5
coord: 340..507
e-value: 8.8E-47
score: 160.5 |
| None | No IPR available | GENE3D | 3.40.50.300 | | coord: 106..339
e-value: 1.8E-62
score: 212.4 |
| None | No IPR available | GENE3D | 3.40.50.300 | | coord: 508..648
e-value: 1.4E-27
score: 98.2 |
| None | No IPR available | PANTHER | PTHR24031:SF331 | ATP-DEPENDENT RNA HELICASE DDX25 | coord: 508..823 |
| None | No IPR available | PANTHER | PTHR24031:SF331 | ATP-DEPENDENT RNA HELICASE DDX25 | coord: 90..505 |
| None | No IPR available | PANTHER | PTHR24031 | RNA HELICASE | coord: 90..505
coord: 508..823 |
| None | No IPR available | CDD | cd00268 | DEADc | coord: 131..333
e-value: 8.08299E-69
score: 223.901 |
| IPR011545 | DEAD/DEAH box helicase domain | PFAM | PF00270 | DEAD | coord: 154..317
e-value: 6.3E-27
score: 94.4
coord: 503..624
e-value: 5.4E-16
score: 58.8 |
| IPR014014 | RNA helicase, DEAD-box type, Q motif | PROSITE | PS51195 | Q_MOTIF | coord: 129..157
score: 9.905 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 509..791 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 200..484 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk08119 ID=Tk08119|Name=Tk08119|organism=Tigriopus kingsejongensis|type=polypeptide|length=824bp
LRSFTDIADWKDSLIRFRPDRSARESKARVQTSPVSRLRTMLAFASNTPL
PPPNPTDWTYAADAGRQIPPGSGNVLQDPPTTLANEGGPTLSLAEQSLFQ
KIMRKGLVESSYDLEIQRQDPKSPLYSVKSFEALNLKAELLKGVYAMGFN
APSKIQETALPALLADPPLNMIAQSQSGTGKTAAFVLAMLSRVDPSQHYP
QVLCLSPTYELALQTGEVASKMSHFANDIAIRYAVRGEEIPRGSRISDHV
IIGTPGKVLDWALKLKAFDLSKIRVFVLDEADVMIATQGHQDQSIRIKKQ
LPQGCQTMLFSATYDTTVMGFAENIVLDPAIIRLRREEETVFNIGQYWVQ
CETPDLKYEAIANIYGVITIGQAIIFCRTRQMASWLAKKLIKDGHTCALL
SGELSVSDRINVLDRFRVGKEKILISTNVLSRGIDVEQVTIVINYDLPVD
HTNGKADCETYLHRIGRTGRFGKSGLAINLVDGEKSMNTLRDIESHFGKP
IVKLDTENVLCLSPTYELALQTGEVASKMSHFANDIAIRYAVRGEEIPRG
SRISDHVIIGTPGKVLDWALKLKAFDLSKIRVFVLDEADVMIATQGHQDQ
SIRIKKQLPQGCQTMLFSATYDTTVMGFAENIVLDPAIIRLRREEETVFN
IGQYWVQCETPDLKYEAIANIYGVITIGQAIIFCRTRQMASWLAKKLIKD
GHTCALLSGELSVSDRINVLDRFRVGKEKILISTNVLSRGIDVEQVTIVI
NYDLPVDHTNGKADCETYLHRIGRTGRFGKSGLAINLVDCEKSMNTLRDI
ESHFGKPIVKLDTENVTEIENLQN back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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