Tk08155, Tk08155 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk08155
Unique NameTk08155
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length765
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001523Paired domainPRINTSPR00027PAIREDBOXcoord: 46..61
score: 87.43
coord: 84..101
score: 83.77
coord: 102..119
score: 84.27
coord: 64..82
score: 63.51
IPR001523Paired domainSMARTSM00351pax3coord: 42..166
e-value: 3.2E-87
score: 305.7
IPR001523Paired domainPFAMPF00292PAXcoord: 42..166
e-value: 6.8E-72
score: 239.2
IPR001523Paired domainPROSITEPS00034PAIRED_1coord: 76..92
IPR001523Paired domainPROSITEPS51057PAIRED_2coord: 42..168
score: 62.134
IPR001523Paired domainCDDcd00131PAXcoord: 42..169
e-value: 5.07577E-82
score: 255.036
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 218..280
e-value: 4.8E-27
score: 105.8
IPR001356Homeobox domainPFAMPF00046Homeoboxcoord: 219..275
e-value: 3.4E-22
score: 77.9
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 216..276
score: 21.378
IPR001356Homeobox domainCDDcd00086homeodomaincoord: 219..276
e-value: 1.23105E-26
score: 100.781
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 111..168
e-value: 1.6E-31
score: 109.7
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 42..110
e-value: 4.7E-37
score: 127.6
NoneNo IPR availableGENE3D1.10.10.60coord: 204..278
e-value: 2.7E-30
score: 105.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 348..404
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 348..420
NoneNo IPR availablePANTHERPTHR24329:SF248PAIRED BOX PROTEIN PAX-7coord: 61..283
NoneNo IPR availablePANTHERPTHR24329FAMILY NOT NAMEDcoord: 61..283
IPR017970Homeobox, conserved sitePROSITEPS00027HOMEOBOX_1coord: 251..274
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 44..168
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 211..281

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold735_size104922-snap-gene-0.23-mRNA-1maker-scaffold735_size104922-snap-gene-0.23-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk08155 ID=Tk08155|Name=Tk08155|organism=Tigriopus kingsejongensis|type=polypeptide|length=765bp
MSGSFNLRPFFGGYPFQGKPTRGYKHQIDQEDSLNPLFPGAGQGRVNQLG
GVFINGRPLPNHIRLKIIEMAAAGVRPCVISRQLRVSHGCVSKILNRYQE
TGSIRPGVIGGSKPRVATPDVERRIDDYKKDNPGIFSWEIRDRLIKDGLC
DRNSAPSVSSISRILRGSGHVVQSAVPPRHFETEEMRRDHSITGILGGHE
EDDSDVDSEPGIPLKRKQRRCRTTFTAEQIEELERAFERTQYPDVYTREE
LAQRTKLSEARVQVWFSNRRARWRKQVGNQQAALTAFSASAAAAAAAASV
TCYNGSTGNPSVSSGYHSLHETSSALHSQGGGWTNNFFPHQQASSMTSAF
PSSQMMSMLSSANGSSGASGSDPPQVASPSDPNSNGFGESSAGSSNNIHS
NPVAPNLSPAGHVHDGLTHQWGVKQSGPMAANWNNQFQSMAAHGGGVGAK
MEMACWGSSEVPSTAGYAPMMNDMFGQTFAPAAAGGLTSYPAVAALAASA
GSEGEWPHLRTTWAPVPGLGGFHPQPRTDAELAEEGWVQLSSCGDSNPNF
PGDRFVTSADDNDIVLVFDGNGFIAGIQTIVPMDKAMDDKYFGFSSSPYY
QVGDFFGEDVYYTTVYFVDPSIICNGGRTQEEFMAEGTGNQIAIQNGPTS
SDFILAPLTKKEAIAESMWNEHKCFLDMGDHFFTFDYDPDESCDIVPYQL
VYIDGKLNGVVFQHIAPLDSPRFETINELAINAIVDTPPTCLVELSKTPG
LRALHVYVSDYIIIC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001523Paired_dom
IPR001356Homeobox_dom
IPR036388WH-like_DNA-bd_sf
IPR017970Homeobox_CS
IPR009057Homeobox-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
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