Tk08212, Tk08212 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk08212
Unique NameTk08212
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length727
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003975Potassium channel, voltage dependent, Kv4PRINTSPR01497SHALCHANNELcoord: 474..488
score: 86.97
coord: 68..81
score: 57.79
coord: 180..194
score: 93.33
coord: 429..445
score: 54.55
coord: 318..337
score: 85.45
coord: 143..159
score: 57.75
coord: 161..175
score: 40.3
coord: 415..426
score: 98.48
coord: 220..236
score: 75.4
IPR028325Voltage-gated potassium channelPRINTSPR00169KCHANNELcoord: 257..277
score: 50.76
coord: 383..409
score: 67.66
coord: 82..101
score: 62.06
coord: 323..346
score: 45.7
coord: 178..206
score: 38.07
coord: 231..254
score: 40.25
coord: 354..376
score: 72.25
coord: 294..320
score: 62.28
IPR028325Voltage-gated potassium channelPANTHERPTHR11537VOLTAGE-GATED POTASSIUM CHANNELcoord: 32..561
IPR003968Potassium channel, voltage dependent, KvPRINTSPR01491KVCHANNELcoord: 394..405
score: 85.9
coord: 82..92
score: 69.55
coord: 299..307
score: 78.98
coord: 323..337
score: 54.17
IPR000210BTB/POZ domainSMARTSM00225BTB_4coord: 41..140
e-value: 3.6E-18
score: 76.3
IPR024587Potassium channel, voltage dependent, Kv4, C-terminalPFAMPF11879DUF3399coord: 469..537
e-value: 1.2E-13
score: 51.2
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 187..416
e-value: 9.6E-39
score: 133.0
IPR003131Potassium channel tetramerisation-type BTB domainPFAMPF02214BTB_2coord: 44..132
e-value: 5.9E-28
score: 97.0
IPR021645Shal-type voltage-gated potassium channels, N-terminalPFAMPF11601Shal-typecoord: 2..29
e-value: 3.5E-14
score: 51.9
NoneNo IPR availableGENE3D1.10.287.70coord: 307..417
e-value: 4.1E-29
score: 102.5
NoneNo IPR availableGENE3D3.30.710.10coord: 1..144
e-value: 8.4E-53
score: 179.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 533..552
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 562..592
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 533..592
NoneNo IPR availablePANTHERPTHR11537:SF182POTASSIUM VOLTAGE-GATED CHANNEL SUBFAMILY D MEMBER 3coord: 32..561
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 356..373
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 250..260
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 407..727
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 374..384
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 280..284
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..226
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 324..344
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 385..406
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 227..249
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 285..303
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 261..279
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..15
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 304..323
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 345..355
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..13
score: 0.516
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 181..411
NoneNo IPR availableTMHMMTMhelixcoord: 325..344
NoneNo IPR availableTMHMMTMhelixcoord: 185..207
NoneNo IPR availableTMHMMTMhelixcoord: 385..407
NoneNo IPR availableTMHMMTMhelixcoord: 227..249
NoneNo IPR availableTMHMMTMhelixcoord: 354..373
IPR027359Voltage-dependent channel domain superfamilyGENE3D1.20.120.350coord: 160..306
e-value: 2.1E-37
score: 130.1
IPR011333SKP1/BTB/POZ domain superfamilySUPERFAMILY54695POZ domaincoord: 40..145

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold1241_size53772-snap-gene-0.14-mRNA-1maker-scaffold1241_size53772-snap-gene-0.14-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk08212 ID=Tk08212|Name=Tk08212|organism=Tigriopus kingsejongensis|type=polypeptide|length=727bp
MASVAAWLPFARAAAIGWVPIATNPLPPPPAIEGKQRTEDEKLVVNISGR
RFETWQNTLEKYPDTLLGSNEKDFFYEEESKEYFFDRDPDIFRHILNYYR
TGKLHFPKNECLTQYDEELAFFGIMPDVIGDCCYEDYRDRKRENAERLMD
DKLDEEEGGDGIVPEKVRERMWRAFETPHTSTPALVFYYVTGFFIAVSVM
ANVVETVSCGRVPGRNDVQPCGEKYKIMFFCLDTACVMIFTGEYFLRLYA
APDRCKFMRSVMSVIDFVAIMPYYIGLGLSDDNEVSGAFVTLRVFRVFRI
FKFSRHSQGLRILGYTLQSCASELGFLVFSLAMAIIIFATIMFYCEKSVS
GSTFTSIPAAFWYTIVTMTTLGYGDMVPSTMLGKLIGGVCSLSGVLVIAL
PVPVIVSNFSRIYHQNQRADKRRAQKKARLARIQIAKATSGAAFVSKKKA
AEAKMAARAAGIAVDDNGKEDIFEMQHHHLLRCLEKTTDREFVEVDLPFN
GAPKRPGSSPVRASSPEMGGNRVTNVFTSCCRGGARNSSSSSCCQKGSDD
QLELESGTVPGGSNGGRRSGNSGGQVDASRGGENATTNILSKGARKEDFN
DVQVLVSLEKSSPPLVEEKSWCPCELLLLINPSSMGSLRFISNSHRHNSC
QAEDSGIAGKRSVCDMFQEGAKGVNGSIRGASRDPRFLSFTALMEAAEVT
FSMKVVLAVRRNSRLSFKFLILEAMRL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003975K_chnl_volt-dep_Kv4
IPR028325VG_K_chnl
IPR003968K_chnl_volt-dep_Kv
IPR000210BTB/POZ_dom
IPR024587K_chnl_volt-dep_Kv4_C
IPR005821Ion_trans_dom
IPR003131T1-type_BTB
IPR021645Shal-type_N
IPR027359Volt_channel_dom_sf
IPR011333SKP1/BTB/POZ_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005249voltage-gated potassium channel activity
GO:0005515protein binding
GO:0005216ion channel activity
Vocabulary: Cellular Component
TermDefinition
GO:0008076voltage-gated potassium channel complex
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006813potassium ion transport
GO:0055085transmembrane transport
GO:0006811ion transport
GO:0051260protein homooligomerization
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