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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | PRINTS | PR00411 | PNDRDTASEI | coord: 141..163
score: 42.2
coord: 413..427
score: 42.09
coord: 286..295
score: 34.71
coord: 182..197
score: 72.49
coord: 584..604
score: 33.75
coord: 493..514
score: 36.32
coord: 562..577
score: 40.93
coord: 321..346
score: 33.3
coord: 456..463
score: 65.56 |
| None | No IPR available | PRINTS | PR00368 | FADPNR | coord: 142..161
score: 37.54
coord: 441..463
score: 35.54
coord: 321..339
score: 28.55
coord: 412..428
score: 36.45
coord: 283..301
score: 28.72 |
| None | No IPR available | GENE3D | 3.40.30.10 | | coord: 28..135
e-value: 1.2E-34
score: 120.3 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..29 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..16 |
| None | No IPR available | PANTHER | PTHR43256:SF3 | THIOREDOXIN REDUCTASE 3 | coord: 40..624 |
| None | No IPR available | PANTHER | PTHR43256 | FAMILY NOT NAMED | coord: 40..624 |
| None | No IPR available | CDD | cd03419 | GRX_GRXh_1_2_like | coord: 48..130
e-value: 4.04366E-35
score: 124.96 |
| IPR036188 | FAD/NAD(P)-binding domain superfamily | GENE3D | 3.50.50.60 | | coord: 140..302
e-value: 1.3E-121
score: 408.1
coord: 428..484
e-value: 1.3E-121
score: 408.1 |
| IPR036188 | FAD/NAD(P)-binding domain superfamily | GENE3D | 3.50.50.60 | | coord: 303..427
e-value: 1.3E-121
score: 408.1 |
| IPR036188 | FAD/NAD(P)-binding domain superfamily | SUPERFAMILY | 51905 | FAD/NAD(P)-binding domain | coord: 137..480 |
| IPR016156 | FAD/NAD-linked reductase, dimerisation domain superfamily | GENE3D | 3.30.390.30 | | coord: 496..623
e-value: 2.1E-50
score: 172.1 |
| IPR016156 | FAD/NAD-linked reductase, dimerisation domain superfamily | SUPERFAMILY | 55424 | FAD/NAD-linked reductases, dimerisation (C-terminal) domain | coord: 494..618 |
| IPR001100 | Pyridine nucleotide-disulphide oxidoreductase, class I | PIRSF | PIRSF000350 | Hg-II_reductase_MerA | coord: 48..591
e-value: 2.4E-54
score: 182.8 |
| IPR023753 | FAD/NAD(P)-binding domain | PFAM | PF07992 | Pyr_redox_2 | coord: 140..477
e-value: 2.7E-54
score: 184.3 |
| IPR002109 | Glutaredoxin | PFAM | PF00462 | Glutaredoxin | coord: 49..111
e-value: 2.9E-19
score: 69.0 |
| IPR002109 | Glutaredoxin | PROSITE | PS51354 | GLUTAREDOXIN_2 | coord: 37..138
score: 23.595 |
| IPR011899 | Glutaredoxin, eukaryotic/virial | TIGRFAM | TIGR02180 | TIGR02180 | coord: 49..130
e-value: 2.4E-28
score: 96.1 |
| IPR004099 | Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain | PFAM | PF02852 | Pyr_redox_dim | coord: 497..606
e-value: 3.4E-22
score: 78.7 |
| IPR006338 | Thioredoxin/glutathione reductase selenoprotein | TIGRFAM | TIGR01438 | TIGR01438 | coord: 138..624
e-value: 1.5E-206
score: 684.9 |
| IPR011767 | Glutaredoxin active site | PROSITE | PS00195 | GLUTAREDOXIN_1 | coord: 51..67 |
| IPR012999 | Pyridine nucleotide-disulphide oxidoreductase, class I, active site | PROSITE | PS00076 | PYRIDINE_REDOX_1 | coord: 183..193 |
| IPR036249 | Thioredoxin-like superfamily | SUPERFAMILY | 52833 | Thioredoxin-like | coord: 38..133 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk08341 ID=Tk08341|Name=Tk08341|organism=Tigriopus kingsejongensis|type=polypeptide|length=624bp
LGQVGPGTTQTPKRAFSSHRIHPLGSRSSMAPVEGLRARIEGLIREHPVM
VFSKTTCPFCDQVKDLLKSRQIQAHYVELDTLGAEGQAMQDALQEVSGQR
TVPNVFINGQHLGGCSETISADSSGKLQGLLRSSSHNYDYDTIVIGGGSG
GLVASKECSRLGQKVAVLDFVQPTPIGTSWGLGGTCVNVGCIPKKLMHQA
SLLGESVKDAQMFGWQVGDDGKRALDWVKMVEAIQSHIGALNWGYKVALR
DAKVKFLNEYASFVDAHTIKAVNKKGKESQYTAKNFVLAMGGRPKYPDIP
GAKEYGITSDDIFSLPYNPGKTLCVGASYISLECAGFLNGAGLDTTVMVR
SILLRGFDQQMANKIGEYMEEDGINFVRECVPYKMELIEEGKPGKIKVYA
KYNDGTEFEDVFNTVLFAIGRDPCTSGLGLEDIGVKMNKSGFVISDEAEK
TSLDHIYAIGDILEDKPELTPVAIKQGMLLARRMVLGDKLLVNYNNIATT
VFTPLEYGCVGLSEEDAAAKYGKEDVEVFHKNFWPLEWTLAKRPEGACYI
KLLCLKSQELKVIGFHYLGPNAGEATQGYAGMIGMGAKKSDFDSLVGIHP
TNAEWFINMDITKSSGVDPKAAGC back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0009055 | electron transfer activity |
| GO:0015035 | protein disulfide oxidoreductase activity |
| GO:0004791 | thioredoxin-disulfide reductase activity |
| GO:0016668 | oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
| GO:0045454 | cell redox homeostasis |
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