Tk08540, Tk08540 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk08540
Unique NameTk08540
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length879
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002077Voltage-dependent calcium channel, alpha-1 subunitPRINTSPR00167CACHANNELcoord: 440..464
score: 71.75
coord: 752..778
score: 42.94
coord: 293..308
score: 66.6
coord: 401..418
score: 65.54
IPR005446Voltage-dependent calcium channel, L-type, alpha-1 subunitPRINTSPR01630LVDCCALPHA1coord: 201..212
score: 38.89
coord: 568..586
score: 30.99
coord: 657..672
score: 69.79
coord: 743..756
score: 37.7
coord: 150..168
score: 59.36
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 286..450
e-value: 1.2E-35
score: 122.8
coord: 593..773
e-value: 2.2E-37
score: 128.5
coord: 790..864
e-value: 2.7E-11
score: 43.1
coord: 122..282
e-value: 4.1E-40
score: 137.4
IPR027359Voltage-dependent channel domain superfamilyGENE3D1.20.120.350coord: 112..239
e-value: 9.0E-31
score: 108.4
coord: 581..703
e-value: 3.7E-26
score: 93.5
NoneNo IPR availableGENE3D1.10.287.70coord: 793..871
e-value: 9.8E-16
score: 59.6
coord: 290..448
e-value: 6.3E-23
score: 82.8
coord: 704..779
e-value: 8.5E-17
score: 63.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 484..503
NoneNo IPR availablePANTHERPTHR10037:SF228VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE D SUBUNIT ALPHA-1coord: 789..864
coord: 82..291
coord: 291..769
NoneNo IPR availablePANTHERPTHR10037VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUMcoord: 82..291
coord: 291..769
NoneNo IPR availablePANTHERPTHR10037VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUMcoord: 789..864
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 294..323
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 183..193
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 644..649
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 194..213
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 625..643
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 799..826
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 214..233
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 283..293
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 741..760
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 162..182
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 592..613
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 827..879
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 614..624
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 718..740
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 673..717
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 259..282
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 780..798
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 761..779
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 442..591
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 234..253
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 143..161
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 650..672
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 254..258
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 417..441
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 324..416
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..123
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 124..142
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 591..771
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 287..331
coord: 377..447
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 122..278
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 789..864
NoneNo IPR availableTMHMMTMhelixcoord: 762..784
NoneNo IPR availableTMHMMTMhelixcoord: 805..827
NoneNo IPR availableTMHMMTMhelixcoord: 720..742
NoneNo IPR availableTMHMMTMhelixcoord: 259..281
NoneNo IPR availableTMHMMTMhelixcoord: 160..182
NoneNo IPR availableTMHMMTMhelixcoord: 588..610
NoneNo IPR availableTMHMMTMhelixcoord: 191..213
NoneNo IPR availableTMHMMTMhelixcoord: 415..437
NoneNo IPR availableTMHMMTMhelixcoord: 302..324
NoneNo IPR availableTMHMMTMhelixcoord: 123..145
NoneNo IPR availableTMHMMTMhelixcoord: 625..647

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold81_size397536-snap-gene-2.23-mRNA-1maker-scaffold81_size397536-snap-gene-2.23-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk08540 ID=Tk08540|Name=Tk08540|organism=Tigriopus kingsejongensis|type=polypeptide|length=879bp
MEGEPTYPGPGSSRGGQQHPHRRSVNNNGLGGVVIDDSMATPGGGESSNW
PGQPGDPGGGDEGVEAMGDEVMEDDKPTAVTEKKPARRIGAKPPPDRAPR
SIYCFSVKNKFRKKCIEFVEWKPFEFLILITILGNCVALAVYTPFPAEDT
NEANLVLEKIEYIFLVIFTGECVMKIIAYGFWQHPTAYLRSAWNLLDFTI
VMIGVISTILSTLKIEGFDVKALRAFRVLRPLRLVSGVPSLQVVLNAILM
AMIPLLHIALLVMFVMIIYAIIGLELFSGLLHKTCFHNLTGLQIVMNSII
MAMVPLMHIAFLVLFVLIIFAIIGMELFSGLFHKTCFNNATGEMVEEDDP
TLCGGNYQCDEEAGHVCQEYWEGPNFGITNFDNFGLSMLTVFQCVTLEGW
TDVLYWVNDSAGNSWPWIYFVSLVLVGAFFIMNLILGTLCGEFSKEREKA
KSRGDFQKHRERQQIEEDLRGYLDWITQAEDLEAEPTTDHTRGRGGSMAD
GGSVGDINGAGANSLNLGPVAKATPVVMELIKSSMIPVQQVMRAKVTSES
EAKNNDDVLMEPDTWWEKKKKAVDKANRRARRACRKAVKSQAMFWTIIVL
VFLNTCVLATEHYRQPVWLDHFQDVTNLFFVVLFTVEMFLKMYSLGLQGY
FVSLFNRFDCFVVLSSILELILTNNDVMPPLGLSVLRCVRLLRTFKVTRY
WASMGNLVKSLVNSISSINSLLVILFLFIFIFSLLGMQIFGGKFTDATES
RSHFDSFPQSCLTVFQVETIITFSAFLSLSPPLACHARCRYWKSLQNLLA
SLINSIEAIVSLLVLLFLFLGIFALLGTQVFGGKIPVRKVGAYLQKPRAN
FDSFSNSLFTVFQVPGHREIRPIFHLMPT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002077VDCCAlpha1
IPR005446VDCC_L_a1su
IPR005821Ion_trans_dom
IPR027359Volt_channel_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005245voltage-gated calcium channel activity
GO:0005216ion channel activity
Vocabulary: Biological Process
TermDefinition
GO:0070588calcium ion transmembrane transport
GO:0055085transmembrane transport
GO:0006811ion transport
Vocabulary: Cellular Component
TermDefinition
GO:0005891voltage-gated calcium channel complex
GO:0016020membrane
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