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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| IPR004000 | Actin family | PRINTS | PR00190 | ACTIN | coord: 153..166
score: 97.31
coord: 178..197
score: 96.3
coord: 64..73
score: 96.55
coord: 87..98
score: 92.79
coord: 274..290
score: 91.95
coord: 99..121
score: 92.34 |
| IPR004000 | Actin family | SMART | SM00268 | actin_3 | coord: 43..413
e-value: 1.3E-237
score: 805.4 |
| IPR004000 | Actin family | PFAM | PF00022 | Actin | coord: 41..411
e-value: 4.1E-149
score: 496.5 |
| IPR004000 | Actin family | PANTHER | PTHR11937 | ACTIN | coord: 38..411 |
| None | No IPR available | GENE3D | 3.90.640.10 | | coord: 218..310
e-value: 2.6E-191
score: 637.0 |
| None | No IPR available | GENE3D | 3.30.420.40 | | coord: 46..175
e-value: 2.6E-191
score: 637.0
coord: 377..409
e-value: 2.6E-191
score: 637.0 |
| None | No IPR available | GENE3D | 3.30.420.40 | | coord: 176..217
e-value: 2.6E-191
score: 637.0
coord: 311..376
e-value: 2.6E-191
score: 637.0 |
| None | No IPR available | PANTHER | PTHR11937:SF278 | BETA-ACTIN-LIKE PROTEIN 3-RELATED | coord: 38..411 |
| None | No IPR available | CDD | cd00012 | NBD_sugar-kinase_HSP70_actin | coord: 46..219
e-value: 3.42682E-20
score: 85.7183 |
| None | No IPR available | SUPERFAMILY | 53067 | Actin-like ATPase domain | coord: 184..412 |
| None | No IPR available | SUPERFAMILY | 53067 | Actin-like ATPase domain | coord: 41..191 |
| IPR020902 | Actin/actin-like conserved site | PROSITE | PS01132 | ACTINS_ACT_LIKE | coord: 142..154 |
| IPR004001 | Actin, conserved site | PROSITE | PS00406 | ACTINS_1 | coord: 91..101 |
| IPR004001 | Actin, conserved site | PROSITE | PS00432 | ACTINS_2 | coord: 394..402 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk08736 ID=Tk08736|Name=Tk08736|organism=Tigriopus kingsejongensis|type=polypeptide|length=443bp
VFLLSFPTEVSQPSSAQFLLQDSFCSRPAPLNSKLGIMCDDEVAALVVDN
GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR
GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNP
KANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT
VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI
KEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALF
QPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADR
MQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
DESGPGIVHRKDLNVVSVYLVDMGRIQTVSKQALDRVRLNRVQ back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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