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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | COILS | Coil | Coil | coord: 356..376 |
None | No IPR available | GENE3D | 3.30.420.470 | | coord: 48..134 e-value: 7.6E-9 score: 37.3 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 500..515 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 500..528 |
None | No IPR available | PANTHER | PTHR24082:SF283 | NUCLEAR HORMONE RECEPTOR HR96 | coord: 282..482 |
None | No IPR available | PANTHER | PTHR24082 | NUCLEAR HORMONE RECEPTOR | coord: 282..482 |
None | No IPR available | CDD | cd06966 | NR_DBD_CAR | coord: 283..376 e-value: 6.79531E-64 score: 201.135 |
None | No IPR available | SUPERFAMILY | 57716 | Glucocorticoid receptor-like (DNA-binding domain) | coord: 282..368 |
IPR001628 | Zinc finger, nuclear hormone receptor-type | PRINTS | PR00047 | STROIDFINGER | coord: 334..342 score: 56.6 coord: 342..350 score: 55.17 coord: 301..316 score: 54.16 coord: 285..301 score: 46.09 |
IPR001628 | Zinc finger, nuclear hormone receptor-type | SMART | SM00399 | c4gold | coord: 282..353 e-value: 8.4E-34 score: 128.3 |
IPR001628 | Zinc finger, nuclear hormone receptor-type | PFAM | PF00105 | zf-C4 | coord: 284..352 e-value: 1.7E-23 score: 82.7 |
IPR001628 | Zinc finger, nuclear hormone receptor-type | PROSITE | PS00031 | NUCLEAR_REC_DBD_1 | coord: 285..311 |
IPR001628 | Zinc finger, nuclear hormone receptor-type | PROSITE | PS51030 | NUCLEAR_REC_DBD_2 | coord: 282..357 score: 18.058 |
IPR013088 | Zinc finger, NHR/GATA-type | GENE3D | 3.30.50.10 | | coord: 282..380 e-value: 2.5E-31 score: 109.7 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk08787 ID=Tk08787|Name=Tk08787|organism=Tigriopus kingsejongensis|type=polypeptide|length=528bp LEFCESQLSKDGFSASVRSVFGKMEAKRRRVLDLLSAGMTVKEVMDIVSS SRSLVDKVKKLKKDGKPACGRWPSSPDCSPLDYGIWGYVESKACRTPPKS VSDLKASVEEHWAAMDVDYVGKVCPAFRGRQSSFDDSCFLPDDWNLGQRS PSVLSVLSSSPISPIHEFYYQQCRRHHLANLHQFVRASIPSVSSAVRRHD HLSPSQPPSHGLWSASTPASRRSSLTEPSARPRVRHHSQIQAGEFKRRFK MDPLHVDQEETVETSGGKADNDSNDASDKSLVKLCAVCGDKALGYNFNAL TCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGM KKEWILSDEEKQQKRMKIEENRAKKRHDGPGSHENSLESPGPDLSTGSQP PPLVFTINNDSSSLERPQARVLPSSRTPTLEDGEPLAKSPRLLDPEASSS QSSPPQFTLIKHELTTSNSPPQNPTLAPLPEALYVQPNLMAFEVQETQID PSRTGFPSNEPETPGLDLTTLVPPPIPH back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
Term | Definition |
GO:0008270 | zinc ion binding |
GO:0003700 | DNA-binding transcription factor activity |
GO:0043565 | sequence-specific DNA binding |
Vocabulary: Biological Process
Term | Definition |
GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Cellular Component
Term | Definition |
GO:0005634 | nucleus |
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