Tk09011, Tk09011 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk09011
Unique NameTk09011
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length1404
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1249..1269
NoneNo IPR availableGENE3D3.30.160.20coord: 1101..1182
e-value: 1.1E-22
score: 82.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1369..1404
NoneNo IPR availablePANTHERPTHR11207RIBONUCLEASE IIIcoord: 365..1210
NoneNo IPR availablePANTHERPTHR11207:SF0RIBONUCLEASE 3coord: 365..1210
NoneNo IPR availableSUPERFAMILY54768dsRNA-binding domain-likecoord: 1093..1175
IPR000999Ribonuclease III domainSMARTSM00535riboneu5coord: 967..1096
e-value: 2.1E-40
score: 150.2
coord: 787..921
e-value: 8.4E-42
score: 154.9
IPR000999Ribonuclease III domainPFAMPF14622Ribonucleas_3_3coord: 805..913
e-value: 3.7E-22
score: 78.8
IPR000999Ribonuclease III domainPFAMPF00636Ribonuclease_3coord: 989..1074
e-value: 3.1E-17
score: 63.0
IPR000999Ribonuclease III domainPROSITEPS00517RNASE_3_1coord: 810..818
IPR000999Ribonuclease III domainPROSITEPS50142RNASE_3_2coord: 720..900
score: 31.296
IPR000999Ribonuclease III domainPROSITEPS50142RNASE_3_2coord: 952..1075
score: 30.949
IPR000999Ribonuclease III domainCDDcd00593RIBOccoord: 803..913
e-value: 5.58233E-40
score: 142.367
IPR000999Ribonuclease III domainCDDcd00593RIBOccoord: 967..1095
e-value: 6.35773E-37
score: 133.507
IPR014720Double-stranded RNA-binding domainSMARTSM00358DRBM_3coord: 1103..1176
e-value: 1.5E-11
score: 54.3
IPR014720Double-stranded RNA-binding domainPFAMPF00035dsrmcoord: 1103..1174
e-value: 4.6E-12
score: 46.4
IPR014720Double-stranded RNA-binding domainPROSITEPS50137DS_RBDcoord: 1102..1177
score: 12.499
IPR014720Double-stranded RNA-binding domainCDDcd00048DSRMcoord: 1102..1173
e-value: 2.13984E-13
score: 64.2159
IPR036389Ribonuclease III, endonuclease domain superfamilyGENE3D1.10.1520.10coord: 770..913
e-value: 1.3E-38
score: 133.7
IPR036389Ribonuclease III, endonuclease domain superfamilyGENE3D1.10.1520.10coord: 711..760
e-value: 1.0E-5
score: 27.0
IPR036389Ribonuclease III, endonuclease domain superfamilyGENE3D1.10.1520.10coord: 947..1093
e-value: 2.1E-33
score: 117.2
IPR036389Ribonuclease III, endonuclease domain superfamilySUPERFAMILY69065RNase III domain-likecoord: 951..1098
IPR036389Ribonuclease III, endonuclease domain superfamilySUPERFAMILY69065RNase III domain-likecoord: 713..746
coord: 795..913
IPR011907Ribonuclease IIIHAMAPMF_00104RNase_IIIcoord: 955..1172
score: 20.753

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold1840_size26652-snap-gene-0.6-mRNA-1maker-scaffold1840_size26652-snap-gene-0.6-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk09011 ID=Tk09011|Name=Tk09011|organism=Tigriopus kingsejongensis|type=polypeptide|length=1404bp
MAHYQSLVSMTRSHPPPIPPLPPSGSEAAPPPPAYPPPGLHHHPQLHHHP
PPVGSYPVNFAQPPPSVVPSYAPYNPGYQSSTYFYYPHALASAAAQPPTL
PNPFSVPPPNCLPAPQAIQASPSAGGALPSRKSPPRHGGRRYRSRSRSRS
RSPGRRRRSEYRRSSRSPSRSSRDRYRGRDRRSPSAASSSHRRHGYSERD
KYRRRSPPSDRHDPTKASVRSRPQSPTRGPSRRRPTPPGISVKARELFER
RINMSHEEVIREEKKIWTRSAPADLYYERDPSNPLMMRARPKLNELCDQF
EQDLLVDREKAKTVFPAYTSPKFALPPSRCKNGHAQSGAESEEDEPAEED
DEAAKNESMEWLQYRQARPNRLHPELWENRGNEFNDGPTCRCSVKARNHG
IRHGIYQGEKPVVELDPDTNNSDRLYHYRIAVTPPTNFLVLQPTTIHHDE
HEFIFEGFSLFTTEPLKDLPPCKVVRFNIEYSILYLEEKIPDNFTVRELK
LFHKYFFVELLELLDWDISDRFYFMPRFVRDLSEDGKEILSMNEVTKYIL
NSYKPLISGTDLLPMVKMTPTEWIDYVEKLKGMLVTKPGMKPGAFRIDQL
DREQDEAKGMIKYPEIVHFGTRPPQLCYAGNPDYQKAWREFVKYRHLLAN
MAKPTFKEKRQLEVLEEKLLDMRSNSKLKRDVTIAVDSQGFFQTGLMSDI
AQHGMLLPVLVNHLRLYSSLEYFQEQVDYTFKNRHLLQLAVTHPSYRENY
GTNPDHARTTLSNCGIRQPEYGDKKVLFANNRKRGINMLINIMSRFGKNQ
ETESKVPHNERLEFLGDAVVEFITSVHLFYMFPDLEEGGLATYRGALVQN
QHLAVLAEVLGLENYMLYAHGSDLCHDAELRHAMANCFEAVMGAIYLDGG
IEAVDKIFAKALFGSDSVLCQVWTNLTHHPLQLQEPKGDRHWIPKYPILQ
KLSEFEESVGVEFTHIRLLARAFTDRSLGLSVLTLGSNQRMEFLGDTVLQ
LITSNYLYRHFPEHHEGHLSLLRSSIVNNRTQAVVCDDIGISMYAQFANP
KHDLKIKDRADLLEAFLGALYIDKDLDYCTKFAEVCFFPRLTHFIVNQEW
NDPKSKLQQCCLTLRTMNGSDPDIPNYKVVESKGPTNTRIYTVAVYFRGD
RLATADGHSIQDAEMQAAKSALENCSHLFPHLSYQKRIVAKSLYKQHKDR
LREEWLKEARKKRKELGLDEDPEDPDKKSEIIAREEKLDRDHHKKMSQIR
AEERQRERTNQEIKAAATKRQRRSPSWEGSSPVSSTELSPPRSYSQRSSS
VGDRRRSSSRSDPLPPPHKRERPMVKDEVEDDEVVVVDPKIVIKAEEGLE
EPPPAVLNGLALIREYAHEDPRRASRVSSSDIEVIEIKQEGSSDREDGEI
SDSE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000999RNase_III_dom
IPR014720dsRBD_dom
IPR036389RNase_III_sf
IPR011907RNase_III
Vocabulary: Molecular Function
TermDefinition
GO:0004525ribonuclease III activity
GO:0003723RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
GO:0016075rRNA catabolic process
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