Tk09088, Tk09088 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk09088
Unique NameTk09088
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length682
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.12780coord: 96..543
e-value: 3.2E-71
score: 242.3
NoneNo IPR availableGENE3D3.30.300.30coord: 545..644
e-value: 1.7E-11
score: 46.6
NoneNo IPR availablePANTHERPTHR43107FAMILY NOT NAMEDcoord: 68..682
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 102..682
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..53
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 54..72
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 84..101
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..14
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 73..83
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 15..34
NoneNo IPR availableSUPERFAMILY56801Acetyl-CoA synthetase-likecoord: 98..646
NoneNo IPR availableTMHMMTMhelixcoord: 54..73
NoneNo IPR availableTMHMMTMhelixcoord: 319..341
NoneNo IPR availableTMHMMTMhelixcoord: 17..39
IPR000873AMP-dependent synthetase/ligasePFAMPF00501AMP-bindingcoord: 110..549
e-value: 6.4E-59
score: 199.5
IPR025110AMP-binding enzyme, C-terminal domainPFAMPF13193AMP-binding_Ccoord: 558..633
e-value: 4.4E-7
score: 30.7
IPR020845AMP-binding, conserved sitePROSITEPS00455AMP_BINDINGcoord: 280..291

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold295_size218279-snap-gene-0.24-mRNA-1maker-scaffold295_size218279-snap-gene-0.24-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk09088 ID=Tk09088|Name=Tk09088|organism=Tigriopus kingsejongensis|type=polypeptide|length=682bp
LTSDLNAKTMIGQRTLAVVCSCFMILCIPEEIGARIFPLAGFKYLRPPFS
WPRWVLAVTMFIGLSGYVRTLWIIQQTIGRDMKLIYRILFRVMGPLLRAK
MKNLTVAQMFEETVQRNPDKTMITFVNRPNPSEKLSFAEVDSLANQTGNY
FRSQSLCQGDVVAVMLENRVDHTGTWLGLTKIGVISAMVNINIKGNPLLH
SIDITNAKGILFSDETESALESIVDQLDPNIKLFKLSTKAPKNELLKTNC
HLVYGAIRRCSDTRPSECSMLVKFTDPLMYVFTSGTTGLPKAATVSHSRY
MLTGHALYGMCAMDRDKDVLYTMLPMYHTSANGLCTGAVIMSGMSMVCRA
KFSASQYWSDCVDNGVTVAQYIGEVARYLINTPKSASESHQKVRMLFGNG
MRADIFDEIRQRFNVDICEFYGATEGNCNLINFMNKKGAVGFVSRLFPFL
LPYRVFKVDPETGDFVRDPRTGLCVECESGEVGELVSPIAKGNPVRDFDG
YLDRKATSQKVAGDVFNHGDHCFRSGDLMVMDDLGYLYFVDRAGDTFRWK
GENVSTMEVESILSRILGYKDLNVYGVQVTGTEGRACMLAVVMGPGQQLD
LADLFVKVEQHLPAYARPVFVRFLSRMEMTSTYKFRKINLMKAGFDVRSL
QDPIFYQDSDRRTYTRLTPDIYTAIQNQQHKL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000873AMP-dep_Synth/Lig
IPR025110AMP-bd_C
IPR020845AMP-binding_CS
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Add to Basket