Tk09103, Tk09103 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk09103
Unique NameTk09103
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length159
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020479Homeobox domain, metazoaPRINTSPR00024HOMEOBOXcoord: 45..56
score: 43.5
coord: 60..70
score: 65.44
coord: 70..79
score: 78.97
IPR000047Helix-turn-helix motifPRINTSPR00031HTHREPRESSRcoord: 61..77
score: 60.99
coord: 52..61
score: 43.88
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 23..85
e-value: 9.5E-25
score: 98.2
IPR001356Homeobox domainPFAMPF00046Homeoboxcoord: 24..80
e-value: 4.0E-21
score: 74.5
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 21..81
score: 21.362
IPR001356Homeobox domainCDDcd00086homeodomaincoord: 28..82
e-value: 3.50204E-22
score: 81.906
NoneNo IPR availableGENE3D1.10.10.60coord: 9..93
e-value: 2.5E-24
score: 86.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..159
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..148
NoneNo IPR availablePANTHERPTHR24326:SF220HOMEOBOX PROTEIN ROUGHcoord: 18..95
NoneNo IPR availablePANTHERPTHR24326FAMILY NOT NAMEDcoord: 18..95
IPR017970Homeobox, conserved sitePROSITEPS00027HOMEOBOX_1coord: 56..79
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 17..83

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold295_size218279-processed-gene-1.11-mRNA-1snap_masked-scaffold295_size218279-processed-gene-1.11-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk09103 ID=Tk09103|Name=Tk09103|organism=Tigriopus kingsejongensis|type=polypeptide|length=159bp
MASSGFGRAKPRMARRRRKDARQRRQRTTFTSDQTLRLELEYQRNEYISR
PRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQIDHQYRCLAFGIPPT
PYSPSFCTECYYKPGSCGSLHQGSLIPSPLASSNLGPPESPLPGSPTNNY
MPTPNKMVT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020479Homeobox_metazoa
IPR000047HTH_motif
IPR001356Homeobox_dom
IPR017970Homeobox_CS
IPR009057Homeobox-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
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