Tk09248, Tk09248 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk09248
Unique NameTk09248
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length459
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 334..358
e-value: 0.52
score: 19.4
coord: 394..416
e-value: 0.0054
score: 26.0
coord: 364..388
e-value: 5.2E-4
score: 29.3
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 366..388
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 396..416
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 336..358
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 364..393
score: 15.916
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 394..421
score: 11.011
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 334..363
score: 13.775
NoneNo IPR availableGENE3D3.30.160.60coord: 329..360
e-value: 2.0E-8
score: 36.0
NoneNo IPR availableGENE3D3.30.710.10coord: 7..126
e-value: 8.2E-10
score: 40.8
NoneNo IPR availableGENE3D3.30.160.60coord: 388..429
e-value: 2.4E-9
score: 39.2
NoneNo IPR availableGENE3D3.30.160.60coord: 362..387
e-value: 5.1E-14
score: 53.9
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 334..358
e-value: 0.0069
score: 16.7
coord: 394..416
e-value: 5.0E-4
score: 20.3
coord: 364..388
e-value: 6.5E-4
score: 19.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 437..459
NoneNo IPR availablePANTHERPTHR23235TRANSCRIPTION FACTOR SP3coord: 220..441
IPR000210BTB/POZ domainPFAMPF00651BTBcoord: 24..122
e-value: 1.5E-9
score: 38.0
IPR000210BTB/POZ domainPROSITEPS50097BTBcoord: 33..103
score: 12.061
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 345..403
IPR011333SKP1/BTB/POZ domain superfamilySUPERFAMILY54695POZ domaincoord: 15..115

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold495_size155559-processed-gene-0.17-mRNA-1snap_masked-scaffold495_size155559-processed-gene-0.17-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk09248 ID=Tk09248|Name=Tk09248|organism=Tigriopus kingsejongensis|type=polypeptide|length=459bp
MALSAANAFHVDESGPDFVLEELETYLNQQVYSDLNIISKESLAVSAHCA
VLCSVSTYLKEVIAEGFSPFAQGPITVCMPFASYDDIRRLLHLVYLGEVS
IRSTEKARFLALLETLRIDQSLDMSGLAGDDTMTKIQMAHNGVPPHRPKV
ITPTVTITPRAQVIKQAEDDISDDQYGELEEEAAAEEDISQYDDEEDESL
HYLEPHTEMTIDDDDTAMDSSSEVSQDVPSLQMPPMHTWQPLPVAPLPMP
QLPLPPSITIERTNRAKLNAVTTSVTSITSDSHRNQLDQHTRDMLTQIPG
EVSNSGGAKYERCKCPNCQDVGGRPAMMGEVTMHICHYPECGKQYKKTSH
LRAHLRSHIGDQPYMCSWPNCGKKFTRSDELHRHFRIHTGEKKHSCPHCD
KKFSRSDHLKKHLTSHLKNNIPTPFPTMMGYLPLPGELGIKQEMPDEDSS
QFSDTSQQT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR000210BTB/POZ_dom
IPR036236Znf_C2H2_sf
IPR011333SKP1/BTB/POZ_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005515protein binding
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