Tk09283, Tk09283 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk09283
Unique NameTk09283
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length1202
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 790..872
NoneNo IPR availableCOILSCoilCoilcoord: 225..343
NoneNo IPR availableCOILSCoilCoilcoord: 880..925
NoneNo IPR availableCOILSCoilCoilcoord: 396..447
NoneNo IPR availableCOILSCoilCoilcoord: 760..780
NoneNo IPR availableCOILSCoilCoilcoord: 351..371
NoneNo IPR availableCOILSCoilCoilcoord: 683..724
NoneNo IPR availableCOILSCoilCoilcoord: 997..1024
NoneNo IPR availableCOILSCoilCoilcoord: 969..989
NoneNo IPR availableCOILSCoilCoilcoord: 462..482
NoneNo IPR availableCOILSCoilCoilcoord: 1058..1078
NoneNo IPR availableCOILSCoilCoilcoord: 186..213
NoneNo IPR availableGENE3D3.40.50.300coord: 1..256
e-value: 1.5E-47
score: 164.8
NoneNo IPR availableGENE3D3.40.50.300coord: 1021..1202
e-value: 1.6E-52
score: 179.5
NoneNo IPR availableGENE3D3.30.70.1620coord: 592..671
e-value: 2.2E-29
score: 104.0
NoneNo IPR availableGENE3D1.20.1060.20coord: 531..591
e-value: 2.2E-29
score: 104.0
coord: 672..678
e-value: 2.2E-29
score: 104.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 268..295
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 235..261
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 235..295
NoneNo IPR availablePANTHERPTHR43977FAMILY NOT NAMEDcoord: 1..1192
NoneNo IPR availableCDDcd03272ABC_SMC3_eukcoord: 3..158
e-value: 2.94663E-95
score: 302.257
IPR010935SMCs flexible hingeSMARTSM00968SMC_hinge_2coord: 531..644
e-value: 1.4E-28
score: 110.9
IPR010935SMCs flexible hingePFAMPF06470SMC_hingecoord: 532..644
e-value: 3.4E-23
score: 82.1
IPR024704Structural maintenance of chromosomes proteinPIRSFPIRSF005719SMCcoord: 1..1193
e-value: 1.2E-162
score: 540.8
IPR003395RecF/RecN/SMC, N-terminalPFAMPF02463SMC_Ncoord: 2..1181
e-value: 4.2E-50
score: 170.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 825..920
coord: 976..1190
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..210
coord: 1088..1174
IPR036277SMCs flexible hinge superfamilySUPERFAMILY75553Smc hinge domaincoord: 479..690

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold175_size286436-processed-gene-1.20-mRNA-1snap_masked-scaffold175_size286436-processed-gene-1.20-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk09283 ID=Tk09283|Name=Tk09283|organism=Tigriopus kingsejongensis|type=polypeptide|length=1202bp
MYIKQVIIQGFKSYREQTVVEPFDPGHNVVVGRNGSGKSNFFYAIQFVLS
DEYSHLRPEQRQALLHEGTGPRVISAYVEIIFDNSDNRLPIDKDEVFLRR
VIGSKKDNYFLNKKMVPRSEVMNLLESAGFSRANPYYIVKQGKINQMATA
PDSQRLKLLREVAGTRVYDERREESKTILKETESKREKIDEFLKTIEDRL
TTLEEEKEELKEYQKYDKMRRALEYTIHDRELQETRKKLNEMESRRKNSG
EEAERLRNGLQEAQDAAKAASREVKDLKVKEASAKEERDTLNGELQQLTK
EKTRLEFVIKDLTDEVSGDNKSKDRAEQELSKLRETIGVKEGELETLKPQ
YEEMKKKEDECTRELALKEQKRKELYAKQGRGSQFTSKEQRDEWIKKELK
SLNKQIRDKTEQIERLTEDLKRDGKRRSELEKRIEEATGEQDNFRSNIDD
QNKGFYELKKKKDSLQSERNELCRKEMNLQQSFSAMKEELSKADQTLRSM
AGKPILNGRDSVRRVLQIFRDKGGPMGQIAESYFGLVIENFECEQSIYTA
VEVTAGNRLFHHIVESDKVGTQILKEMNKQKLPGEVTFMPLNRLHVRQIE
YPQTKDAIAMVSKLEYEDRYDKALRYIFGRTLICRNLEVATQLARTTGLD
CVTLDGDQVSSKGSLTGGYFNKSRSRLEIQKTRSEKNEEINKQDNEMKKL
RNKLQEIEADINRVVSEMQKMETKNSKAKDVFDKVRTDVRLMKEELNGIE
RNTNPKERSLTQLKASLESMQTSKEGLESEVNQELLATLSTRDQKEVDQL
NDDIRVLKQENKKAFAERMRLEAQKNKLENLLTNNLNRRKDELVQALQEI
SVEDRKRQLENTGNELESLDSRIGNNSDSLKSLDKKLTEVQKKRKKAQGE
LESHRLREREIADKIEEDAKELEKMASKQTVYQAKITDCTKKIRDLGSLP
TDAFTKYKNMTQKQLFKQLEKANLELKKYSHVNKKALDQFISFSEQKEKL
MARKEELDRGRKKIQDLMDVLEQRKFEAILFTFKQVSKYFQEVFKKLVPT
GQGTLAIKREADDEGDSHEDQARRLENATGVSCSVSFSGRNAEMKDMAQL
SGGQKSLVALALIFAIQKCDPAPFYLFDEIDAALDAQHRKAVADMIHELA
DGAQFITTTFRPELLAHASKFYGVKFRNKVSHVDCVSRDDAYDFVEDDTT
QA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010935SMC_hinge
IPR024704SMC
IPR003395RecF/RecN/SMC_N
IPR027417P-loop_NTPase
IPR036277SMC_hinge_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005524ATP binding
Vocabulary: Cellular Component
TermDefinition
GO:0005694chromosome
Vocabulary: Biological Process
TermDefinition
GO:0051276chromosome organization
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