Tk09324, Tk09324 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk09324
Unique NameTk09324
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length510
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 354..377
e-value: 5.6
score: 15.5
coord: 263..287
e-value: 0.17
score: 20.9
coord: 409..433
e-value: 1.6
score: 17.8
coord: 93..119
e-value: 320.0
score: 0.0
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 265..287
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 411..433
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 263..292
score: 9.078
NoneNo IPR availableGENE3D3.30.160.60coord: 256..294
e-value: 5.6E-6
score: 28.1
NoneNo IPR availablePFAMPF12756zf-C2H2_2coord: 356..456
e-value: 4.4E-21
score: 75.0
coord: 214..305
e-value: 5.1E-21
score: 74.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 319..340
NoneNo IPR availablePANTHERPTHR13267ZINC FINGER PROTEIN 277coord: 88..485
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 32..510
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 251..323
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 339..466

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold486_size158769-snap-gene-0.29-mRNA-1maker-scaffold486_size158769-snap-gene-0.29-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk09324 ID=Tk09324|Name=Tk09324|organism=Tigriopus kingsejongensis|type=polypeptide|length=510bp
MILTASICPALAIFLMSAMIFFSCCSILALSRSNSRMALVKALWFFLNIS
SGKKKYFSDVNFPEWTKSQAAITTSLVLPEESLGRPFGEETTTACLKCSK
EFPVPSQGQELVAHLTMEHFIIIDEIQLIADIPTYLDYYRRKLEHTALKD
FAFIHRVKVTSKDKGENVEGDIFIICDRRAEDRDLRIQLQMKRLEQVLEV
QEKERTDPTFHRCCLFCRQVFEGCPAELFNHLAFDHNFSVGQPHNLVFVN
DLLDLLEEKMDSMVCVFCEKTFKSREVLKEHMRKKGHKKINAKNAMYDKF
YIVNYLEFGKNWEAVSKEQDLDEDDQDDLPNGFDSDKGDDENDWSDWRGD
LQGAVCLFCPVNYTDIDNLLTHMTSIHDFDFQHMRNSLKLSFYQQVKLIN
YVRRQVHLNMCIFCSDKFETKDELLEHMGKSEHFKIPEQTDSWDQPEYFF
PTYENDNLLHFLDDVDMFDKQAAHSVPVYPEDVTVKDSILEAPEFRDSIC
PPRRRQFKKK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
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