Tk09392, Tk09392 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk09392
Unique NameTk09392
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length233
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 142..197
e-value: 1.4E-5
score: 34.6
IPR001356Homeobox domainPFAMPF00046Homeoboxcoord: 143..187
e-value: 4.5E-10
score: 39.1
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 140..187
score: 9.556
IPR001356Homeobox domainCDDcd00086homeodomaincoord: 143..187
e-value: 2.56877E-12
score: 58.0237
NoneNo IPR availableGENE3D1.10.10.60coord: 127..188
e-value: 1.2E-14
score: 55.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..63
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..147
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..48
NoneNo IPR availablePANTHERPTHR24208:SF105DLIM1coord: 114..187
NoneNo IPR availablePANTHERPTHR24208FAMILY NOT NAMEDcoord: 114..187
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 128..187

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold1045_size67585-snap-gene-0.11-mRNA-1maker-scaffold1045_size67585-snap-gene-0.11-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk09392 ID=Tk09392|Name=Tk09392|organism=Tigriopus kingsejongensis|type=polypeptide|length=233bp
MDFITTGLITQYFDEDEEYEDDRFVHPHLHPSPTYPGLPPPPPPSSSTLS
SLSPTSPTALPDFSPSPSGVGRPHSLPPELHSPGSQGALGPHSRLNAVLA
GPTDAIGTKAGEDPTSHSNGGSDPGAGTEAQDGEDMNSAGKRRGPRTTIK
AKQLEVLKTAFDQTPKPTRHIREQLAKETGLPMRVIQRKDDTLIDEFHTI
KRSWEIQRTLGTQQDRNLPEFKSIYPAAIHIFA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001356Homeobox_dom
IPR009057Homeobox-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
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