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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | GENE3D | 1.20.1250.20 | | coord: 133..547
e-value: 5.1E-52
score: 179.2 |
| None | No IPR available | PANTHER | PTHR24064 | FAMILY NOT NAMED | coord: 29..582 |
| None | No IPR available | PANTHER | PTHR24064:SF316 | FI01439P-RELATED | coord: 29..582 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 195..215 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 374..393 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 452..469 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 428..446 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 394..398 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 242..252 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 399..421 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 253..273 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 221..241 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 216..220 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 274..284 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 422..427 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 536..596 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 72..170 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 510..514 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 189..194 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 171..188 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 470..489 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 490..509 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 1..44 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 303..373 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 515..535 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 285..302 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 45..71 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 447..451 |
| None | No IPR available | TMHMM | TMhelix | | coord: 487..509 |
| None | No IPR available | TMHMM | TMhelix | | coord: 428..450 |
| None | No IPR available | TMHMM | TMhelix | | coord: 194..216 |
| None | No IPR available | TMHMM | TMhelix | | coord: 373..395 |
| None | No IPR available | TMHMM | TMhelix | | coord: 516..535 |
| None | No IPR available | TMHMM | TMhelix | | coord: 46..68 |
| None | No IPR available | TMHMM | TMhelix | | coord: 220..242 |
| None | No IPR available | TMHMM | TMhelix | | coord: 399..421 |
| None | No IPR available | TMHMM | TMhelix | | coord: 286..308 |
| None | No IPR available | TMHMM | TMhelix | | coord: 254..276 |
| None | No IPR available | TMHMM | TMhelix | | coord: 168..187 |
| IPR005828 | Major facilitator, sugar transporter-like | PFAM | PF00083 | Sugar_tr | coord: 169..543
e-value: 4.2E-17
score: 62.1 |
| IPR005829 | Sugar transporter, conserved site | PROSITE | PS00216 | SUGAR_TRANSPORT_1 | coord: 417..433 |
| IPR020846 | Major facilitator superfamily domain | PROSITE | PS50850 | MFS | coord: 128..540
score: 13.164 |
| IPR020846 | Major facilitator superfamily domain | CDD | cd06174 | MFS | coord: 168..536
e-value: 2.24001E-17
score: 81.5913 |
| IPR036259 | MFS transporter superfamily | SUPERFAMILY | 103473 | MFS general substrate transporter | coord: 169..544 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk09538 ID=Tk09538|Name=Tk09538|organism=Tigriopus kingsejongensis|type=polypeptide|length=596bp
LYRLGISSSMAVTDPEVIKPDSEKVEHRDFEDILNIVGGWGRYQYILLSF
FVLQCVFLTYATFTPILFLYVPDDHYCDVSHWLQMPDVQDQFTQEELLEL
MIPKNADGSRSKCSIYQGTPQEIRDVQNASSQPISACLHGWDYNSTDFYH
SAATQMEWVCDDAWRGPFTQAMFSLGAIVGTLIFGYVADHWGRFASFYGC
TVILMVGGLLTPIFGEFVGFSIIRFVQGLSFDTFFTMFYVLALEYVEPEK
RALIGNLALAVGIGFAGSVQPWILYFLRDWETFNMILYIQVTLVFVTPWF
VFESVRWLSTQGRQEEAHIIIQKIATINGKDLSSRELVTIQEILAYEQQA
TQSDHSGGASILDLFRTPHLRKNFIIMTGLSAHLFEATIRIISIFEQSIF
ITFSISCFLEFPADLLTIWGLDWIGRRWSVFISLILAGILNFSIILSLHV
PIVVTTLSLASRFLATYAYNTAINISMEIVPTVVRGQGVAFAKVFCHLAV
MLAPFVVYLDIYAKFLPYLVIGCTCLITCILALILPETAGENLPDSLDDG
KDFGKHQGFWHIPCILEMQSRKTPLEAVESQMTIVDSTDNQVTSVP back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
| GO:0005215 | transporter activity |
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