Tk09614, Tk09614 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk09614
Unique NameTk09614
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length402
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005819Histone H5PRINTSPR00624HISTONEH5coord: 46..63
score: 54.32
coord: 125..139
score: 48.89
coord: 19..40
score: 36.87
coord: 158..175
score: 46.91
coord: 88..112
score: 44.0
IPR005818Linker histone H1/H5, domain H15SMARTSM00526h15plus2coord: 182..248
e-value: 2.4E-30
score: 116.8
coord: 30..96
e-value: 2.4E-30
score: 116.8
IPR005818Linker histone H1/H5, domain H15PFAMPF00538Linker_histonecoord: 185..256
e-value: 1.6E-30
score: 105.2
coord: 33..104
e-value: 1.6E-30
score: 105.2
IPR005818Linker histone H1/H5, domain H15PROSITEPS51504H15coord: 32..106
score: 34.181
IPR005818Linker histone H1/H5, domain H15PROSITEPS51504H15coord: 184..258
score: 34.181
IPR005818Linker histone H1/H5, domain H15CDDcd00073H15coord: 184..257
e-value: 8.19559E-29
score: 105.781
IPR005818Linker histone H1/H5, domain H15CDDcd00073H15coord: 30..105
e-value: 2.11739E-29
score: 107.322
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 183..257
e-value: 5.8E-30
score: 105.2
coord: 31..105
e-value: 5.8E-30
score: 105.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 267..303
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 261..357
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 317..352
NoneNo IPR availablePANTHERPTHR11467HISTONE H1/H5coord: 182..355
NoneNo IPR availablePANTHERPTHR11467:SF90HISTONE H1coord: 182..355
NoneNo IPR availablePANTHERPTHR11467HISTONE H1/H5coord: 15..180
NoneNo IPR availablePANTHERPTHR11467:SF90HISTONE H1coord: 15..180
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 183..270
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 32..105

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold328_size205007-snap-gene-0.14-mRNA-1maker-scaffold328_size205007-snap-gene-0.14-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk09614 ID=Tk09614|Name=Tk09614|organism=Tigriopus kingsejongensis|type=polypeptide|length=402bp
MSTWNGWIGVDVTMSDSPAKTKKVAKPKVAATHPPTSVMVMAAVRALKER
NGSSLPAIKKYIAANYKVDVAKNAHFIKKAVKSLVEKKKLTQPKGTGASG
SFKIPTVVKVEKTKVVKPKKAKTPKKKTATKKVAVEKKAKSPKKKTPAKK
AATKKVEKPAVVAKKPKTPKKKPAKVAKPKVAATHPPTSVMVMAAVRALK
ERNGSSLPAIKKYIAANYKVDVAKNAHFIKKAVKSLVEKKKLTQPKGTGA
SGSFKIPTVVKVEKTKVVKPKKAKTPKKKTATKKVAVEKKAKSPKKKTPA
KKAATKKVEKPAVVAKKPKTPKKKPAVKKAATAKKTSAKKTSPKKRGAPK
KKAPAHLVTSCPDVSHLWTSVRYGTTISPNWRPEFVLVKSDQTMDLLNSL
GD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005819Histone_H5
IPR005818Histone_H1/H5_H15
IPR036388WH-like_DNA-bd_sf
IPR036390WH_DNA-bd_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0000786nucleosome
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006334nucleosome assembly
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