Tk09825, Tk09825 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk09825
Unique NameTk09825
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length390
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000795Transcription factor, GTP-binding domainPRINTSPR00315ELONGATNFCTcoord: 17..27
score: 71.21
coord: 33..44
score: 52.9
coord: 77..86
score: 55.32
IPR000795Transcription factor, GTP-binding domainPFAMPF00009GTP_EFTUcoord: 5..166
e-value: 1.9E-28
score: 99.3
IPR000795Transcription factor, GTP-binding domainPROSITEPS51722G_TR_2coord: 1..169
score: 34.467
IPR004539Translation elongation factor EF1A, eukaryotic/archaealTIGRFAMTIGR00483TIGR00483coord: 4..373
e-value: 1.1E-173
score: 575.6
NoneNo IPR availableGENE3D3.40.50.300coord: 3..167
e-value: 4.0E-57
score: 195.3
NoneNo IPR availableGENE3D2.40.30.10coord: 264..370
e-value: 2.8E-51
score: 174.3
NoneNo IPR availableGENE3D2.40.30.10coord: 169..261
e-value: 4.1E-42
score: 144.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 371..390
NoneNo IPR availablePANTHERPTHR23115TRANSLATION FACTORcoord: 4..387
NoneNo IPR availablePANTHERPTHR23115:SF227ELONGATION FACTOR 1-ALPHAcoord: 4..387
NoneNo IPR availableCDDcd03705EF1_alpha_IIIcoord: 264..367
e-value: 7.79392E-70
score: 212.823
NoneNo IPR availableCDDcd03693EF1_alpha_IIcoord: 172..260
e-value: 4.40766E-58
score: 182.002
IPR004160Translation elongation factor EFTu/EF1A, C-terminalPFAMPF03143GTP_EFTU_D3coord: 263..370
e-value: 3.8E-40
score: 136.6
IPR004161Translation elongation factor EFTu-like, domain 2PFAMPF03144GTP_EFTU_D2coord: 189..254
e-value: 4.6E-14
score: 52.5
IPR009001Translation elongation factor EF1A/initiation factor IF2gamma, C-terminalSUPERFAMILY50465EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domaincoord: 266..370
IPR009000Translation protein, beta-barrel domain superfamilySUPERFAMILY50447Translation proteinscoord: 172..262
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..190

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold1213_size55396-snap-gene-0.9-mRNA-1maker-scaffold1213_size55396-snap-gene-0.9-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk09825 ID=Tk09825|Name=Tk09825|organism=Tigriopus kingsejongensis|type=polypeptide|length=390bp
LGVIALWKFETPKFYVTIIDAPGHRDFIKNMITGTSQADCGVLIIASGTG
EFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTDPPYSQARFEEIQ
KEVSGFIKKVGYNPAAVPFVPISGWHGDNMLKTSPNMGWYKGWEITRKEG
KATGTTLLEAFDSIIPPQRPFDKPLRLPLQDVYKIGGIGTVPVGRVETGI
IKPGMVVTFAPNQLTTEVKSVEMHHESLVEATPGDNVGFNVKNVSVKDIK
RGFVASDSKNKPATGVKDFTAQVIVLNHPGQICNGYSPVLDCHTAHIACK
FQEIKEKVDRRTGKATEANPKSIKSGDAGIVELVPSKPMCVEAFSDFPPL
GRFAVRDMRQTVAVGVIKSTTPKDMSGTTTKAGTKAIKKK
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000795TF_GTP-bd_dom
IPR004539Transl_elong_EF1A_euk/arc
IPR004160Transl_elong_EFTu/EF1A_C
IPR004161EFTu-like_2
IPR009001Transl_elong_EF1A/Init_IF2_C
IPR009000Transl_B-barrel_sf
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
GO:0003746translation elongation factor activity
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0006414translational elongation
Add to Basket