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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | PRINTS | PR00449 | RASTRNSFRMNG | coord: 185..207
score: 31.75
coord: 127..140
score: 46.01
coord: 11..32
score: 38.85
coord: 67..89
score: 30.48 |
| None | No IPR available | SMART | SM00173 | ras_sub_4 | coord: 8..210
e-value: 4.4E-5
score: -35.2 |
| None | No IPR available | SMART | SM00174 | rho_sub_3 | coord: 13..210
e-value: 4.9E-25
score: 99.2 |
| None | No IPR available | SMART | SM00175 | rab_sub_5 | coord: 11..210
e-value: 4.5E-8
score: -8.9 |
| None | No IPR available | GENE3D | 3.30.710.10 | | coord: 239..314
e-value: 2.7E-7
score: 32.4 |
| None | No IPR available | GENE3D | 3.30.710.10 | | coord: 509..665
e-value: 1.0E-28
score: 102.3 |
| None | No IPR available | GENE3D | 3.40.50.300 | | coord: 7..212
e-value: 1.6E-46
score: 159.9 |
| None | No IPR available | PANTHER | PTHR24072:SF156 | RHO-RELATED BTB DOMAIN CONTAINING, ISOFORM B | coord: 3..709 |
| None | No IPR available | PANTHER | PTHR24072 | RHO FAMILY GTPASE | coord: 3..709 |
| None | No IPR available | CDD | cd01873 | RhoBTB | coord: 9..207
e-value: 3.4195E-100
score: 304.583 |
| IPR000210 | BTB/POZ domain | SMART | SM00225 | BTB_4 | coord: 263..491
e-value: 3.3E-5
score: 33.3
coord: 518..617
e-value: 7.5E-13
score: 58.7 |
| IPR000210 | BTB/POZ domain | PFAM | PF00651 | BTB | coord: 256..300
e-value: 3.8E-7
score: 30.2
coord: 516..614
e-value: 1.9E-12
score: 47.3 |
| IPR000210 | BTB/POZ domain | PROSITE | PS50097 | BTB | coord: 263..299
score: 9.496 |
| IPR000210 | BTB/POZ domain | PROSITE | PS50097 | BTB | coord: 518..581
score: 11.109 |
| IPR001806 | Small GTPase superfamily | PFAM | PF00071 | Ras | coord: 12..207
e-value: 1.6E-24
score: 86.3 |
| IPR003578 | Small GTPase superfamily, Rho type | PROSITE | PS51420 | RHO | coord: 4..207
score: 17.743 |
| IPR011333 | SKP1/BTB/POZ domain superfamily | SUPERFAMILY | 54695 | POZ domain | coord: 511..613 |
| IPR011333 | SKP1/BTB/POZ domain superfamily | SUPERFAMILY | 54695 | POZ domain | coord: 424..489
coord: 248..293 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 11..207 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk09866 ID=Tk09866|Name=Tk09866|organism=Tigriopus kingsejongensis|type=polypeptide|length=739bp
MEDDQPHTELVKCVLVGDNAVGKTRLICARSWKQKVTLSQLLNPHVPTVW
AIDQYRVYKEVLENSKVTMDGFNVSLRLWDTFGDHHKDRRFAYGRSDVVL
MCFDVGRQSSLENCRDMWHQQIKKFCPNTPIILVGCKNDVRFMLNDEQYI
NYCRERSPLVRQVREKDLVMPDQGRMVAKELGVPYYETSVLTFFGVNEVF
ENAIRAALSTRRQQRFWLTSRKALIPTIQEPFCPPRPNLPSPELMASGFQ
ADRQVLFDQAVFTDVILVCGSVGFSAHRFILAAASPSLYKILTTDYSQEP
PATRCSSETSLMSGSLGSNTLGSEFFVANDETEHLLNGGSEQNTPIKAGI
LGLTICGTPNPDPSHRLLKQRRRSNSFNLSPSMGHWSEKIESTSDPKPGV
FKALNHPAIHSLRIQQCESLDSRGRVVTSLQTILTCTRVIPAKAMAQAMK
FIYTGEIDEALCDPTELRQVAEHLNIPGLRTFSANLLKKGKRIDLSPEVT
KTHQNGIKDICLDLSLFADVVFRLDDGAIRAHKPLLMARCDMMLAMFTHD
DFVESSARVVHFPGVSCFTFKELLFYLYTDQSPRVNASNCLGILELGNRL
CLPRLISLSEHTVIDKLTKAIKEEKGDVTDEALKILQLCQAYNAEQLSEW
CLSYLAQNYNHICRKFPKVLRSLRPENQAWLNVHRWPPIWYLKDFDLYQR
LLLDQERRDRPKALKRTRNNSGCLCFSNKTRKGRSYRIA back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005622 | intracellular |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007264 | small GTPase mediated signal transduction |
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