Tk10025, Tk10025 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk10025
Unique NameTk10025
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length548
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002557Chitin binding domainSMARTSM00494chi_10coord: 45..105
e-value: 9.1E-5
score: 31.8
IPR002557Chitin binding domainPFAMPF01607CBM_14coord: 47..103
e-value: 1.8E-9
score: 37.5
IPR002557Chitin binding domainPROSITEPS50940CHIT_BIND_IIcoord: 44..105
score: 11.807
IPR002172Low-density lipoprotein (LDL) receptor class A repeatSMARTSM00192LDLa_2coord: 122..159
e-value: 4.6E-6
score: 36.1
IPR002172Low-density lipoprotein (LDL) receptor class A repeatPFAMPF00057Ldl_recept_acoord: 123..157
e-value: 3.9E-8
score: 33.3
IPR002172Low-density lipoprotein (LDL) receptor class A repeatPROSITEPS50068LDLRA_2coord: 122..158
score: 11.875
IPR002172Low-density lipoprotein (LDL) receptor class A repeatCDDcd00112LDLacoord: 123..157
e-value: 5.87831E-8
score: 46.431
NoneNo IPR availableGENE3D2.170.140.10coord: 46..114
e-value: 3.6E-6
score: 28.4
NoneNo IPR availableGENE3D4.10.400.10coord: 122..160
e-value: 2.3E-7
score: 32.4
NoneNo IPR availableGENE3D3.20.20.370coord: 193..489
e-value: 1.3E-39
score: 138.6
NoneNo IPR availablePANTHERPTHR11177:SF302FI03450Pcoord: 35..548
NoneNo IPR availablePANTHERPTHR11177CHITINASEcoord: 35..548
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..548
NoneNo IPR availableCDDcd10974CE4_CDA_like_1coord: 206..482
e-value: 1.07122E-175
score: 494.163
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..29
score: 0.742
IPR002509NodB homology domainPFAMPF01522Polysacc_deac_1coord: 206..322
e-value: 2.4E-8
score: 33.8
IPR023415Low-density lipoprotein (LDL) receptor class A, conserved sitePROSITEPS01209LDLRA_1coord: 135..157
IPR036055LDL receptor-like superfamilySUPERFAMILY57424LDL receptor-like modulecoord: 120..157
IPR036508Chitin binding domain superfamilySUPERFAMILY57625Invertebrate chitin-binding proteinscoord: 62..105
IPR011330Glycoside hydrolase/deacetylase, beta/alpha-barrelSUPERFAMILY88713Glycoside hydrolase/deacetylasecoord: 204..483

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold1048_size67263-snap-gene-0.27-mRNA-1maker-scaffold1048_size67263-snap-gene-0.27-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk10025 ID=Tk10025|Name=Tk10025|organism=Tigriopus kingsejongensis|type=polypeptide|length=548bp
MKPSRSKPFHGAFTTTLVLVVGLSALGHAARIKRQDSDEEELERQLCEDK
GAGEWFRLESGPNKCRDVIQCTASGLQAIRCPSGLNFDIEKQTCDWKGSV
DNCDVKSKEKKVKPLLFTDEPLCQENLLACGDGNCIERGLFCNGDFDCND
ESDENSCDMDTDPNRAPPCDTTICKLPDCFCSADGQQVPGNLCEVGPAGA
ECTNVPQMVMITFDDAINNNNIDLYNEIFNGERKNPNGCSIKSTFFVSHK
YTNYTAVQHMRSQGHEIAAHSITHNDDESFWTNAVVDDWAKEMAGSRLII
DKYANISDNSVVGLRAPYLRVGGNNQFTMMEEQAFLYDSSITAPLQNPPL
WPYTMYFRMPHKCHGDLQNCPTRSHAVWEMVMNELDRREDPTVDEELAGC
AMVDSCSNILSGDQFYNFLTHNFYRHYDQNRAPLGLFYHAAWLKNNPEFL
DAFLYWVDEVLQAHSDVYFVTMTQVIQWIQNPQTVDQAGAFEPWKEKCAP
VSEPPCLAPNMCKLATKELPGEAVHLHTCVQCPNNYPWLNDPTGDGFF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002557Chitin-bd_dom
IPR002172LDrepeatLR_classA_rpt
IPR002509NODB_dom
IPR023415LDLR_class-A_CS
IPR036055LDL_receptor-like_sf
IPR036508Chitin-bd_dom_sf
IPR011330Glyco_hydro/deAcase_b/a-brl
Vocabulary: Biological Process
TermDefinition
GO:0006030chitin metabolic process
GO:0005975carbohydrate metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Molecular Function
TermDefinition
GO:0008061chitin binding
GO:0005515protein binding
GO:0016810hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0003824catalytic activity
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