Tk10202, Tk10202 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk10202
Unique NameTk10202
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length467
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001320Ionotropic glutamate receptorSMARTSM00079GluR_14coord: 156..446
e-value: 1.4E-12
score: 57.8
IPR001320Ionotropic glutamate receptorPFAMPF00060Lig_chancoord: 282..356
e-value: 4.2E-18
score: 65.5
IPR019594Ionotropic glutamate receptor, L-glutamate and glycine-binding domainSMARTSM00918Lig_chan_Glu_bd_2coord: 166..228
e-value: 7.4E-23
score: 91.9
IPR019594Ionotropic glutamate receptor, L-glutamate and glycine-binding domainPFAMPF10613Lig_chan-Glu_bdcoord: 157..266
e-value: 1.7E-40
score: 137.7
NoneNo IPR availableGENE3D3.40.190.10coord: 150..273
e-value: 1.4E-42
score: 147.0
NoneNo IPR availableGENE3D1.10.287.70coord: 274..359
e-value: 9.2E-26
score: 92.4
NoneNo IPR availableGENE3D3.40.50.2300coord: 13..34
e-value: 1.4E-16
score: 62.8
coord: 60..113
e-value: 1.4E-16
score: 62.8
NoneNo IPR availableGENE3D3.40.50.2300coord: 11..12
e-value: 1.4E-16
score: 62.8
coord: 114..139
e-value: 1.4E-16
score: 62.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..77
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..77
NoneNo IPR availablePANTHERPTHR18966IONOTROPIC GLUTAMATE RECEPTORcoord: 7..355
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 284..303
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..283
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 304..467
NoneNo IPR availableSUPERFAMILY53850Periplasmic binding protein-like IIcoord: 156..286
coord: 338..378
NoneNo IPR availableTMHMMTMhelixcoord: 284..303

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold1554_size35889-snap-gene-0.6-mRNA-1maker-scaffold1554_size35889-snap-gene-0.6-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk10202 ID=Tk10202|Name=Tk10202|organism=Tigriopus kingsejongensis|type=polypeptide|length=467bp
MAAKMQHDTGSHVEYEPAIIYDSLLVLMNTVKALNYHYAPLLLTPQQLVP
EHNGDPLGRKRGSASSPSPTSSVSCRSEKPWEYGPTFYNYLNAAQTEGMT
GQLAFKGGRRSSLSLELMRYSRPTATVNKIGHWSRTGGLSVLNESLIESN
DQEEVILRVVTRQEKPYVMINKLLKGNDAFDGFAIDLLKAISDVVGFKFR
LYIVPDNLYGVYNHETGEWNGIVRQLTDKRADLAVASMTINYARETVIDF
TKPFMNLGISILFKAPKDPATELFSFMNPLALEIWLYMLIAYILVSITIW
IVARFSPYEWAHPHPCVDTGLVFQNDFTLPNSFWFAIGTLMQQGSSADSM
GVAMRSTVRKAAKLAVYDEMIMRVKNHQIPPTILVDAAFGFKSELKDSKT
VFGGVTRDSVRCLFALDSVFSPTKCVPCWVFIHAPMDGWRAFWPKSPYLW
AIPKNHAFVNLLSSLAT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001320Iontro_rcpt
IPR019594Glu/Gly-bd
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004970ionotropic glutamate receptor activity
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