Tk10259, Tk10259 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk10259
Unique NameTk10259
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length463
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000795Transcription factor, GTP-binding domainPRINTSPR00315ELONGATNFCTcoord: 134..145
score: 61.12
coord: 118..128
score: 63.48
coord: 171..180
score: 53.09
coord: 54..67
score: 76.82
coord: 98..106
score: 65.14
IPR000795Transcription factor, GTP-binding domainPFAMPF00009GTP_EFTUcoord: 50..242
e-value: 7.4E-58
score: 195.2
IPR000795Transcription factor, GTP-binding domainPROSITEPS51722G_TR_2coord: 50..245
score: 57.921
IPR004160Translation elongation factor EFTu/EF1A, C-terminalPFAMPF03143GTP_EFTU_D3coord: 340..432
e-value: 2.5E-13
score: 50.2
NoneNo IPR availableGENE3D2.40.30.10coord: 247..341
e-value: 1.7E-31
score: 110.3
NoneNo IPR availableGENE3D3.40.50.300coord: 42..244
e-value: 2.6E-68
score: 231.4
NoneNo IPR availableGENE3D2.40.30.10coord: 344..443
e-value: 1.8E-25
score: 90.9
NoneNo IPR availablePANTHERPTHR43721FAMILY NOT NAMEDcoord: 34..433
NoneNo IPR availablePANTHERPTHR43721:SF5ELONGATION FACTOR TU, MITOCHONDRIALcoord: 34..433
NoneNo IPR availableCDDcd01884EF_Tucoord: 51..244
e-value: 2.52982E-134
score: 383.087
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 53..200
e-value: 4.4E-13
score: 47.3
IPR004161Translation elongation factor EFTu-like, domain 2PFAMPF03144GTP_EFTU_D2coord: 266..332
e-value: 1.9E-15
score: 56.9
IPR004541Translation elongation factor EFTu/EF1A, bacterial/organelleTIGRFAMTIGR00485TIGR00485coord: 43..432
e-value: 5.4E-165
score: 546.8
IPR031157Tr-type G domain, conserved sitePROSITEPS00301G_TR_1coord: 91..106
IPR033720Elongation factor Tu, domain 2CDDcd03697EFTU_IIcoord: 252..338
e-value: 2.49664E-43
score: 145.354
IPR009000Translation protein, beta-barrel domain superfamilySUPERFAMILY50447Translation proteinscoord: 246..339
IPR009001Translation elongation factor EF1A/initiation factor IF2gamma, C-terminalSUPERFAMILY50465EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domaincoord: 343..434
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 41..255

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold178_size283195-snap-gene-1.31-mRNA-1maker-scaffold178_size283195-snap-gene-1.31-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk10259 ID=Tk10259|Name=Tk10259|organism=Tigriopus kingsejongensis|type=polypeptide|length=463bp
MASTLSYLTLRTGLLSSLRSGSYLLRPPGHALFATSSATRAEKEVFKRDK
PHVNIGTIGHVDHGKTTLTAAITKVLAEKKLATFKDYASIDNAPEERNRG
ITINVAHLEYQTEKRHYAHTDCPGHADFIKNMITGASTMDGAILVVGATD
GVMPQTKEHLLLIKQLGMNDIVVFINKCDAADAEMIELVEMEVRELLTEM
GFKGDDVPIVKGSALQAIEEQNDELGKNSILELMDVVDNAIPTPERNLDV
PFMLPIEMVHSIPGRGTVVTGRLERGKLKTGQDIELIGYGRSSKSKITGI
EMFHKTLEEATAGDQMGILIRGLKRGDVRRGMFATKPGVVKQHNKVMAQV
YILTKEEGGTDKPIVSEQNVALFSKTWDTSAFPIIKGKEMAMPGEDSQIL
LHLYKPMALEKNQMFTIRSGGATIGTGKFTEIQKNMSEIEVDYLQSSRKK
KDKMKEQGVISFE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000795TF_GTP-bd_dom
IPR004160Transl_elong_EFTu/EF1A_C
IPR005225Small_GTP-bd_dom
IPR004161EFTu-like_2
IPR004541Transl_elong_EFTu/EF1A_bac/org
IPR031157G_TR_CS
IPR033720EFTU_2
IPR009000Transl_B-barrel_sf
IPR009001Transl_elong_EF1A/Init_IF2_C
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
GO:0003746translation elongation factor activity
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0006414translational elongation
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