Tk10659, Tk10659 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk10659
Unique NameTk10659
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length688
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003392Protein patched/dispatchedPFAMPF02460Patchedcoord: 51..688
e-value: 1.2E-117
score: 394.1
NoneNo IPR availablePANTHERPTHR10796:SF60PATCHED DOMAIN-CONTAINING PROTEIN 3coord: 2..688
NoneNo IPR availablePANTHERPTHR10796PATCHED-RELATEDcoord: 2..688
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 367..389
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 296..321
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 322..326
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 263..284
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 285..295
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 490..510
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 424..489
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 401..423
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 347..366
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 327..346
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 27..45
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 511..688
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 390..400
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 46..262
NoneNo IPR availableSUPERFAMILY82866Multidrug efflux transporter AcrB transmembrane domaincoord: 271..420
NoneNo IPR availableTMHMMTMhelixcoord: 27..49
NoneNo IPR availableTMHMMTMhelixcoord: 493..510
NoneNo IPR availableTMHMMTMhelixcoord: 324..346
NoneNo IPR availableTMHMMTMhelixcoord: 292..314
NoneNo IPR availableTMHMMTMhelixcoord: 263..285
NoneNo IPR availableTMHMMTMhelixcoord: 401..423
NoneNo IPR availableTMHMMTMhelixcoord: 367..386
IPR000731Sterol-sensing domainPROSITEPS50156SSDcoord: 261..420
score: 36.856

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold627_size122700-snap-gene-0.37-mRNA-1maker-scaffold627_size122700-snap-gene-0.37-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk10659 ID=Tk10659|Name=Tk10659|organism=Tigriopus kingsejongensis|type=polypeptide|length=688bp
MCKQHFVDQFMRRIFSILGKEIGRRPLVYLVLPLIGTVISLYGFWTANHE
ADPEYLFIPLNGEGKYERAIIESFFPTNYSAFDPGRITRNGRFGRLHITA
KDNGSTLRDDIFQDMLVLDGIVKNLTFTHNNQTLGFNDVCAKDKGSCWSN
DILGVASVMQEVENNSMSLTYPIWFNPFSFDRVIFPFFCGGIEITEHYTI
ASIYVISLNYFLASGTAFDMERGKIWEKTFLDTIETLEFEHIKVARFSSL
TLEIELEENTNSVIPFFSVNIAIMVVFCVITCLMSDWVRSKPYLGLLGLV
SAILGSITAFGVVMLCGVPFIGINLAAPFLMLGIGIDDTFVFLSSWRRSN
PMEPIPKRLGQCYEDSAVSITITSLTDMLSFFVGIITPFPSVKIFCLYTG
VAVAFTYMYHIFFFGACLALAGIAEEQNRHALTCFKVLPKSQSLEKSKMY
RLFCSGGINRNDPGNQDDMPTFDMMEFFRGPFSRFLLNQYARAMIIVVYL
CYLGVSIWGVSNVKEGLERKNLARFDSYSLEFYTLEDTYFRDYPYRVSVT
FTGALNYSNELTRFDIEDIMQRLENTTFIDPTYSESWLRDFTDYVSRNKD
YEELDITTEDAFVDTLMNVYLAADYNPYSNDVFLNSDGKIGASRFLIQGH
HIKNAVDEKIFVQELRDICKSSNYNVTTYHPYFIYFDQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003392Ptc/Disp
IPR000731SSD
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
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