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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR011701 | Major facilitator superfamily | PFAM | PF07690 | MFS_1 | coord: 164..301
e-value: 4.8E-12
score: 45.4 |
| None | No IPR available | PANTHER | PTHR11360 | MONOCARBOXYLATE TRANSPORTER | coord: 136..665 |
| None | No IPR available | PANTHER | PTHR11360:SF3 | OXALATE/FORMATE ANTIPORTER | coord: 136..665 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 160..178 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 240..260 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 651..669 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 294..360 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 1..140 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 549..567 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 473..492 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 261..271 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 420..441 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 361..383 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 141..159 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 453..472 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 512..522 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 384..419 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 203..213 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 493..511 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 179..202 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 587..650 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 235..239 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 442..452 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 568..586 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 523..548 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 214..234 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 272..293 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 670..688 |
| None | No IPR available | TMHMM | TMhelix | | coord: 274..296 |
| None | No IPR available | TMHMM | TMhelix | | coord: 527..549 |
| None | No IPR available | TMHMM | TMhelix | | coord: 213..235 |
| None | No IPR available | TMHMM | TMhelix | | coord: 242..264 |
| None | No IPR available | TMHMM | TMhelix | | coord: 564..586 |
| None | No IPR available | TMHMM | TMhelix | | coord: 493..515 |
| None | No IPR available | TMHMM | TMhelix | | coord: 448..470 |
| None | No IPR available | TMHMM | TMhelix | | coord: 361..383 |
| None | No IPR available | TMHMM | TMhelix | | coord: 646..668 |
| None | No IPR available | TMHMM | TMhelix | | coord: 419..441 |
| IPR020846 | Major facilitator superfamily domain | CDD | cd06174 | MFS | coord: 188..301
e-value: 3.18527E-8
score: 53.8569 |
| IPR036259 | MFS transporter superfamily | SUPERFAMILY | 103473 | MFS general substrate transporter | coord: 357..589
coord: 132..297
coord: 644..671 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk10724 ID=Tk10724|Name=Tk10724|organism=Tigriopus kingsejongensis|type=polypeptide|length=688bp
FVGQPWVLPARRSVICSAQAAPEHSRRTWRVVRVDSFPPAGSRPLLARPP
SCRIPTPRTRVPASMALVLRLCAGRGSSLVAGPPASLTRLRASLTGTRHL
GVSATALSSANEDAKTSLWAKTLGPESAVTSTPERTNRWTMFLPAFATHV
CLGAPYGWSAISSALSREHGFVVSSSADWALDLCTYPMSVMIAAGGLSAA
LFGPWTMRVGTRMALATGGTIFGLGFVVSAIGVANHNLPMLYAGNLLCGL
GYGCAYTPPIQALLDWFPDKKGLASGIVIAGFGSGALFFSPMMNFLTKAY
STVPQYLGQSLDTVTEGGKLFAQLGDSLKEVVYATQADLAKLPYSELAEG
FYLVDSGNSGVAYSLATIGAIYSSMVLTSAFLIKKPPVGHLPAGWTPPPS
AGGTSGLNVNTSTVMKTPQFWLLFTTSTLLATGGMGLMSVAKPMIGEVFT
SSMPALVTASFASSYLLAMAGGNLAGRLGWAAVSDKIGRRATFNMFTLGA
VPIFASLPYTITQVINDPNGPMAPMYLGLFCASTVAAISIMGGVFAVLPA
YEADLYGPKYVQAIHGRFLVSATMSTIAGPMLLLNLRKVAENSAIQDLLA
KVDPQKFQGLFGAEIAQASTLMEAKTLTISKLMTIMPQGTVDPSPFIYNN
TMYTMAGLVSVAAALHFMVRPVDPKYFEPADNNPKKLH back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
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