Tk10808, Tk10808 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk10808
Unique NameTk10808
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length410
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013144CRA domainSMARTSM00757toby_final6coord: 224..321
e-value: 4.7E-19
score: 79.3
IPR006594LIS1 homology motifSMARTSM00667Lishcoord: 115..147
e-value: 0.0049
score: 26.1
IPR006594LIS1 homology motifPROSITEPS50896LISHcoord: 115..147
score: 9.24
IPR024964CTLH/CRA C-terminal to LisH motif domainPFAMPF10607CLTHcoord: 155..315
e-value: 1.8E-28
score: 99.2
NoneNo IPR availablePANTHERPTHR12170MACROPHAGE ERYTHROBLAST ATTACHER-RELATEDcoord: 1..410
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 349..406
IPR027711Rmd5PANTHERPTHR12170:SF3REQUIRED FOR MEIOTIC NUCLEAR DIVISION 5 HOMOLOG B S. CEREVISIAEcoord: 1..410
IPR006595CTLH, C-terminal LisH motifPROSITEPS50897CTLHcoord: 154..228
score: 8.617
IPR037683Rmd5, degenerated RING (dRING) fingerCDDcd16652dRing_Rmd5p_likecoord: 353..399
e-value: 3.33127E-26
score: 97.7098

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold385_size188773-snap-gene-0.22-mRNA-1maker-scaffold385_size188773-snap-gene-0.22-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk10808 ID=Tk10808|Name=Tk10808|organism=Tigriopus kingsejongensis|type=polypeptide|length=410bp
MDSILSVEKELSTLSEKFNKFDTANGQQLVRSLEVLRNTQKELNQVRSSG
AALTPSQTFNLMKTVQGLNEVVNSFASVHRDLHSSVSKVGKAIDRNFVTD
YDSTSRDDIFRSSEQQKRLNEVILQHFHRQGLTEISESLAQEAKLEDAHV
IKDRFQELNAIVDALAERSLTPALEWSARNRDKMGTGLLDRSPDGCNRAA
SILQSSSLEMKLHKLWFIDLLAKGKCMEAVGYARHYFPHFVKAHEKEVQA
LMGALMFAASGKSLSDSPYAHLLDPILWQEIVDQFVRNACALMGLSIESP
LSVVINAGCTALPALLNIKQVMQQRQVAGAWNPRDELPIEIDLGPECRFH
SIFACPILRQQTTEQNPPLRLTCGHCISKDALTKLTAGHKLKCPYCPVEQ
NPNDARQVFF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013144CRA_dom
IPR006594LisH
IPR024964CTLH/CRA
IPR027711Rmd5
IPR006595CTLH_C
IPR037683Rmd5_dRing
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
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