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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR002781 | Transmembrane protein TauE-like | PFAM | PF01925 | TauE | coord: 111..353
e-value: 5.5E-21
score: 75.2 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..24 |
| None | No IPR available | PANTHER | PTHR31154 | UNCHARACTERIZED | coord: 22..406 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 170..174 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 280..300 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 175..193 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 274..279 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 341..361 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 362..366 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 386..409 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 194..204 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 241..273 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 222..240 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 301..311 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 99..109 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 75..98 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 139..149 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 312..334 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 1..74 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 110..138 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 150..169 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 335..340 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 205..221 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 367..385 |
| None | No IPR available | TMHMM | TMhelix | | coord: 109..131 |
| None | No IPR available | TMHMM | TMhelix | | coord: 205..222 |
| None | No IPR available | TMHMM | TMhelix | | coord: 237..259 |
| None | No IPR available | TMHMM | TMhelix | | coord: 341..363 |
| None | No IPR available | TMHMM | TMhelix | | coord: 75..94 |
| None | No IPR available | TMHMM | TMhelix | | coord: 280..302 |
| None | No IPR available | TMHMM | TMhelix | | coord: 312..334 |
| None | No IPR available | TMHMM | TMhelix | | coord: 171..193 |
| None | No IPR available | TMHMM | TMhelix | | coord: 368..385 |
| None | No IPR available | TMHMM | TMhelix | | coord: 144..166 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk10878 ID=Tk10878|Name=Tk10878|organism=Tigriopus kingsejongensis|type=polypeptide|length=409bp
MEHVSPNTNNPATMQAATPQDETSKSEQIQNKIKHFFVKYFFEGQKLSSQ
QSKAIENLKDDAPWTKRILVKHRRLVGILIPLMFFQVCWWCLAIRWNYFQ
YFPDRYILSITMIFGAAIAGMTSEGGGAVAFPVMTLALGIQPAVARDFSL
MIQSFGMTAAAFTIFWMKIQLEMRSVIFCSLGGIFGMVLGLEVFDQMLDP
PTKKLGFVCIWFSFAFALYLLNRQHKRKTFSCIPNFGIWQAIVLTLTGCV
GGAFSAIAGSGVDICSFAILSLLFRVSEKVATPTSVVLMAINTCVGFYWR
HLMTETGVEPEAWKFLAVCVPIVVFFAPFGSFLSSHFHRQVLAFLIYILD
TIALISAFIVIPMTWQRSVMSASLVTGGFLIFFCISKGGERLLRILEDKE
KKAAEDLGV back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR002781 | TM_pro_TauE-like |
Vocabulary: Cellular Component
| Term | Definition |
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| GO:0016021 | integral component of membrane |
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