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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR006638 | Elp3/MiaB/NifB | SMART | SM00729 | MiaB | coord: 58..264
e-value: 2.5E-6
score: 37.1 |
| IPR013785 | Aldolase-type TIM barrel | GENE3D | 3.20.20.70 | | coord: 58..263
e-value: 1.3E-18
score: 69.1 |
| IPR016163 | Aldehyde dehydrogenase, C-terminal | GENE3D | 3.40.309.10 | | coord: 505..701
e-value: 7.8E-138
score: 461.8 |
| IPR007197 | Radical SAM | PFAM | PF04055 | Radical_SAM | coord: 64..223
e-value: 4.9E-13
score: 49.7 |
| IPR007197 | Radical SAM | SFLD | SFLDS00029 | Radical_SAM | coord: 64..223
e-value: 1.9E-14
score: 48.9 |
| IPR015590 | Aldehyde dehydrogenase domain | PFAM | PF00171 | Aldedh | coord: 279..730
e-value: 6.0E-124
score: 414.0 |
| IPR003698 | Lipoyl synthase | TIGRFAM | TIGR00510 | TIGR00510 | coord: 7..278
e-value: 5.8E-101
score: 335.7 |
| IPR003698 | Lipoyl synthase | SFLD | SFLDF00271 | lipoyl_synthase | coord: 5..277
e-value: 0.0
score: 377.5 |
| IPR003698 | Lipoyl synthase | HAMAP | MF_00206 | Lipoyl_synth | coord: 1..303
score: 120.086 |
| IPR016162 | Aldehyde dehydrogenase, N-terminal | GENE3D | 3.40.605.10 | | coord: 702..726
e-value: 7.8E-138
score: 461.8
coord: 279..504
e-value: 7.8E-138
score: 461.8 |
| None | No IPR available | SFLD | SFLDG01058 | lipoyl_synthase_like | coord: 5..277
e-value: 0.0
score: 377.5 |
| None | No IPR available | PANTHER | PTHR43521 | FAMILY NOT NAMED | coord: 278..748 |
| None | No IPR available | PANTHER | PTHR43521:SF1 | ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE | coord: 278..748 |
| None | No IPR available | CDD | cd07130 | ALDH_F7_AASADH | coord: 279..737
e-value: 0.0
score: 842.253 |
| None | No IPR available | CDD | cd01335 | Radical_SAM | coord: 62..255
e-value: 1.51722E-9
score: 56.1877 |
| None | No IPR available | SUPERFAMILY | 102114 | Radical SAM enzymes | coord: 22..278 |
| IPR029510 | Aldehyde dehydrogenase, glutamic acid active site | PROSITE | PS00687 | ALDEHYDE_DEHYDR_GLU | coord: 501..508 |
| IPR016161 | Aldehyde/histidinol dehydrogenase | SUPERFAMILY | 53720 | ALDH-like | coord: 279..737 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk10913 ID=Tk10913|Name=Tk10913|organism=Tigriopus kingsejongensis|type=polypeptide|length=750bp
MNTATTTTVQPKPKWLRVKLPTGKNYRELRGLVDKYSLNTICQSGSCPNM
GECWGAGTATFMILGNICTRSCGFCGVKTGKPELVDWAEPEKVAKSIKVM
KIKHAVLTSVDRDDLKDMGSIIWGETVNAIRRISPGTTMETLIPDFQGIT
QHMDRLVEVAPEVISHNMETVRRLSREVRIQAQYDRSLEALRYIKEAGQK
RTKTGLMLGLGEKDDEVFKTIEDIRNANVDVITMGQYLQPSKKHLPVKRF
VTPEQFDKFGAFAKELGFRHVESSPLVLNGKVIGEVSTTSEKDFDAVMES
AQEAFKVWRKKPAPLRGEIVRQFGDKLRKYKEPLGKLVSYEMGKSYQEGL
GEVQEMIDICDFAVGLSRQLHGLTMHSERPGHRMYEQYHPLGVVGIISAF
NFPVAVWAWNTALAWVCGDVCVWKPSEKTPLCGVACQNIMAEVLKENDLP
EGISCLINGDYKVGEYMTKSEHIPLISATGSTRMGKIVSQTVAGRLGKSL
LELGGNNAIIVTPDADIKMTVIGGVFGAVGTCGQRCTSTRRIIIHESVYD
TVKEAIVNAYKQLKIGNPLDQSNHVGPLIDTDAVKNYLDALEKVKAEGGT
VIVEGGVLEGEGYESGCYVKPAIAEAENHFEIVQHETFAPVLYLMKYSGT
VEDAIALQNGVRQGLSSAIMTNNLREAESFLSQGGSDCGIANVNIGTSGA
EIGGAFGGEKDTGGGRESGSDAWKIYMRRQTNTINYTTELPLAQGIKFNL back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0051536 | iron-sulfur cluster binding |
| GO:0003824 | catalytic activity |
| GO:0016491 | oxidoreductase activity |
| GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor |
| GO:0051539 | 4 iron, 4 sulfur cluster binding |
| GO:0016992 | lipoate synthase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
| GO:0008152 | metabolic process |
| GO:0009107 | lipoate biosynthetic process |
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