Tk10935, Tk10935 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk10935
Unique NameTk10935
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length1115
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..179
e-value: 1.1E-34
score: 121.4
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 2..104
e-value: 3.6E-17
score: 62.5
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 1..157
score: 20.652
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1048..1089
NoneNo IPR availablePANTHERPTHR24559FAMILY NOT NAMEDcoord: 1..154
NoneNo IPR availablePANTHERPTHR24559:SF250SUBFAMILY NOT NAMEDcoord: 1..154
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 2..142

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold206_size259025-snap-gene-1.21-mRNA-1maker-scaffold206_size259025-snap-gene-1.21-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk10935 ID=Tk10935|Name=Tk10935|organism=Tigriopus kingsejongensis|type=polypeptide|length=1115bp
LDFAVMPRSKGKRYILTILDSYSRYFMAIPCAKDRAIDEARGIFQLFLRH
RVKPLTVSSDKGAHFTGAVHRNFCDQMGIAQELHCPWGPKSSGNIERQHR
TLKNALFILCEDRGTLWSDILEAVVSNMNASINISTGVSPHLTVTGRHPN
LALPQQPNQRIRCSDPASFGMQVNALLRQVHNAVVLANLETDANVEKKLK
VSLICLVGTAVLFAHSHAEPGGWGKRSSDPDTSATPAFSKRSAGGWDKRS
ADPEASPVAGGWGKRSADPEANPKAGGWSKRSADPEANPMAGGWGKRSAD
PEANPSAGGWGKRSAGGWGKRSADPEANPMAGGWGKRSADPEAGGWGKRS
AGGWGKRSADPEANPMAGGWGKRSADPEANPLAGGWGKRSAGGWGKRSAD
PEANPMAGGWGKRSAGGWGKRSADPEASPMAGGWGKRSAGGWGKRSADPE
ANPIAGGWGKRSAGGWGKRSADPEANPIAGGWGKRSAGGWGKRSADPEAN
PMAGGWGKRSADPEANPIAGGWGKRSAGGWGKRSADSEANPMAGGWGKRS
ADPEAGGWGKRSAGGWGKRSADPKANPMAGGWGKRSADPKANPMAGGWGK
RSAGGWGKRSADPKANPMAGGWGKRSAGGWGKRSADPEASPMAGGWGKRS
ADPEANPMAGGWGKRSADPEANPMAGGWGKRSADLLPHPPAIGLASGSAE
RLPHPPADLLPHPPAIGLASGSAERLPHPPADLLPHPPAIGLASGSAERL
PHPPAIGLASGSAERLPHPPADLLPHPPAIGLASGSAERLPHPPADLLPH
PPAIGLASGSAERLPHPPADLLPHPPAIGLASGSAERLPHPPAIGLASGS
AERLPHPPADLLPHPPAIGLASGSAERLPHPPAIGLASGSAERLPHPPAD
LLPHPPAIGLASGSAERLPHPPAIGLASGSAERLPHPPADLLPHPPAIGL
GSGSAERLPHPPADLLPHPPAIGLASGSAERFPHPPADLLPHPPANGLAS
GSAERLPHPPAIGLALGSAERLPHPPADLLPHPPAIGLASGSAERLPHPP
AIGLASGSAERLPHPPATGLASGSAERLSHPPAERFPHPPADLLLNAGAD
RPYSLKDILRFVVAF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR001584Integrase_cat-core
IPR012337RNaseH-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: Biological Process
TermDefinition
GO:0015074DNA integration
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