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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR004000 | Actin family | PRINTS | PR00190 | ACTIN | coord: 237..253 score: 57.14 coord: 141..160 score: 93.59 coord: 50..61 score: 69.92 coord: 62..84 score: 87.66 coord: 116..129 score: 97.31 coord: 27..36 score: 96.55 |
IPR004000 | Actin family | SMART | SM00268 | actin_3 | coord: 6..373 e-value: 1.4E-223 score: 758.8 |
IPR004000 | Actin family | PFAM | PF00022 | Actin | coord: 4..373 e-value: 1.4E-144 score: 481.6 |
IPR004000 | Actin family | PANTHER | PTHR11937 | ACTIN | coord: 2..372 |
None | No IPR available | GENE3D | 3.30.420.40 | | coord: 139..180 e-value: 8.9E-185 score: 615.5 coord: 274..339 e-value: 8.9E-185 score: 615.5 |
None | No IPR available | GENE3D | 3.90.640.10 | | coord: 181..273 e-value: 8.9E-185 score: 615.5 |
None | No IPR available | GENE3D | 3.30.420.40 | | coord: 340..372 e-value: 8.9E-185 score: 615.5 coord: 9..138 e-value: 8.9E-185 score: 615.5 |
None | No IPR available | PANTHER | PTHR11937:SF278 | BETA-ACTIN-LIKE PROTEIN 3-RELATED | coord: 2..372 |
None | No IPR available | CDD | cd00012 | NBD_sugar-kinase_HSP70_actin | coord: 9..182 e-value: 6.73239E-18 score: 78.3995 |
None | No IPR available | SUPERFAMILY | 53067 | Actin-like ATPase domain | coord: 147..373 |
None | No IPR available | SUPERFAMILY | 53067 | Actin-like ATPase domain | coord: 4..153 |
IPR020902 | Actin/actin-like conserved site | PROSITE | PS01132 | ACTINS_ACT_LIKE | coord: 105..117 |
IPR004001 | Actin, conserved site | PROSITE | PS00406 | ACTINS_1 | coord: 54..64 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk11048 ID=Tk11048|Name=Tk11048|organism=Tigriopus kingsejongensis|type=polypeptide|length=373bp MYDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGK KDSYIGEEAQSKRGILSLRYPIEHGIVTNWDDMEKIYHHTFYNELRVAPE EHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTT GIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYS FTNTAEREIVRDIKEKLCYVATDFEDEMTTAARSSAITQKYELPDGQIID VGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVL SGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILASL STFQQMWITKQEFDEAGPGIVHR back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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