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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR032104 | Spaetzle | PFAM | PF16077 | Spaetzle | coord: 282..385
e-value: 2.9E-19
score: 69.2 |
| IPR029034 | Cystine-knot cytokine | GENE3D | 2.10.90.10 | | coord: 277..393
e-value: 6.0E-25
score: 89.5 |
| IPR029034 | Cystine-knot cytokine | SUPERFAMILY | 57501 | Cystine-knot cytokines | coord: 251..385 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 28..133 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 68..90 |
| None | No IPR available | PANTHER | PTHR23199 | UNCHARACTERIZED | coord: 71..386 |
| None | No IPR available | PANTHER | PTHR23199:SF12 | NEUROTROPHIN 1, ISOFORM F-RELATED | coord: 71..386 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE | Signal Peptide | coord: 1..17 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 18..420 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_C_REGION | Signal peptide C-region | coord: 14..17 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_H_REGION | Signal peptide H-region | coord: 6..13 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_N_REGION | Signal peptide N-region | coord: 1..5 |
| None | No IPR available | SIGNALP_EUK | SignalP-noTM | SignalP-noTM | coord: 1..17
score: 0.844 |
| None | No IPR available | SIGNALP_GRAM_POSITIVE | SignalP-TM | SignalP-TM | coord: 1..17
score: 0.453 |
| None | No IPR available | SIGNALP_GRAM_NEGATIVE | SignalP-noTM | SignalP-noTM | coord: 1..17
score: 0.612 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk11146 ID=Tk11146|Name=Tk11146|organism=Tigriopus kingsejongensis|type=polypeptide|length=420bp
MALRYLLVVSLTALALADEDLTGSDSHLSHAPLVHHHGAPGPHHAAPNPY
HAPTYSPYQAAAPLHHQQPHHQPHHQPHHQPHHQPQPHHKLHHQPTPYAP
GYQTYAPVYGHPAPAHHGYSPKESSVHRNPYDSHDEYDAIRTQDADLAPN
NPYNNPYLAPHAAQHAVGHHGAAPHHGGAPQHGGYTPYQYDMSKIPECAY
TNKHYYNLTFCLQDDYYPTETIQYELERNKHLVERLLSDITYQSADNLVD
GLTKAEEEGYTYEHYYGNQKHQQYGPDYHGGYVCPSDIFYGRPKRSVNTY
GKWKVVVNLPDEYYAKGYGKGYEKYTQTQRLEQCMYPTAPCSYIDNKYYS
QCLQKHNFVRLLAYTYEEGLHIDSFKLPVACSCHIGDQHYGQGYGGHPVT
PAYGGYQQGYPSPTPTPSYG back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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