Tk11278, Tk11278 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk11278
Unique NameTk11278
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length832
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001040Translation Initiation factor eIF- 4ePFAMPF01652IF4Ecoord: 655..809
e-value: 1.4E-51
score: 174.3
IPR001040Translation Initiation factor eIF- 4ePANTHERPTHR11960EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATEDcoord: 637..832
IPR023398Translation Initiation factor eIF- 4e-likeGENE3D3.30.760.10coord: 645..832
e-value: 1.7E-66
score: 225.3
IPR023398Translation Initiation factor eIF- 4e-likeSUPERFAMILY55418eIF4e-likecoord: 642..825
NoneNo IPR availablePFAMPF13229Beta_helixcoord: 451..563
e-value: 3.6E-6
score: 26.8
coord: 283..415
e-value: 4.7E-7
score: 29.7
NoneNo IPR availablePANTHERPTHR11960:SF3EUKARYOTIC TRANSLATION INITIATION FACTOR 4E TYPE 1Bcoord: 637..832
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 437..614
e-value: 3.5E-6
score: 28.0
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 112..419
e-value: 4.4E-13
score: 51.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 12..93
e-value: 4.9E-7
score: 31.6
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 15..85
IPR019770Eukaryotic translation initiation factor 4E (eIF-4E), conserved sitePROSITEPS00813IF4Ecoord: 707..730
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 132..483
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 447..564

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold14_size734282-snap-gene-1.18-mRNA-1maker-scaffold14_size734282-snap-gene-1.18-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk11278 ID=Tk11278|Name=Tk11278|organism=Tigriopus kingsejongensis|type=polypeptide|length=832bp
MATERAEDPVGRAAQREFECGHYDLALSLFADAAPQTARVHLQRAKCCQY
LARPRQALEHCHRALAAESKWAEAFHLRSAIFQAWQQAVLDGAADAGQAD
GPDFRARARLVVNAALEAPTVTSAVQGQTHVRRLDQALSLARDGDVVFLE
PGHYETSALDEDHGLSPCFIHGQNLTLVGSSVRDCVLTYRSGPESPSGPA
RKLNTFLICATESDTPTLIKNLTFRNLNAESSGTRTKFLGVASGRVIIED
CLFDGLECPAVDAIFANPQICGHLARNYPPPHLTIRYCIFDHCQSFAAIA
LTQARVEIESSYFIGSRLSANDGSEVSLSNCEFVQTGDQAQQCISVSQSR
VSVSGCYIHGLRPSLNSSARNSLGISLTLGSQGRISNNFLYLCGNGIACQ
DSNMVCQSNLIFHCAQRFSEAGQSLGLPGPRGSSTLGLHSAISLTCPAAK
LVVADNYIKKCDIGIYVSGQAMPTLKSNRVESSHFTGLFVQSTARPNILG
NHFVGATHESLARPNCSGIGVLLIMGAGGLIGKNNFENYDLSPIMVFGSC
HPMLKGNLFDNINLDREKQAQTEEKMKLLFQPESLRKDTFFYIVDSELSE
NELRDEILTNQMTIFAEELAKMPVPAEPAEKKDPKVALQSQKSISSVREM
DTKHPLQHSWSLWYFKNDRSKTWEDNLREVVTFNTVEDFWSIYNHIEMAS
RLSMSCDYSVFKAGIKPMWEVPANMKGGRWLINIDKKCRHSMLDNVWLEL
LLAMIGESFGEDGSNVNGAVVNVRNRGDKVALWLSNSDAGPSVMKIGKEV
KRKLNLNMEIAFEAHEDAMSKNGSTTRSSFVI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001040TIF_eIF_4E
IPR023398TIF_eIF4e-like
IPR012334Pectin_lyas_fold
IPR011990TPR-like_helical_dom_sf
IPR019770TIF_eIF_4E_CS
IPR011050Pectin_lyase_fold/virulence
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003743translation initiation factor activity
GO:0005515protein binding
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